EST details — SGN-C177594

Search information 
Request: 177594Match: SGN-C177594
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C177594Clone name: TUS-26-P8
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C177594 is on microarray TOM1 spot ID 1-1-1.4.7.19 [Order] [Tomato Microarray Database]
See unigene SGN-U578867 for alternative clones/ESTs which are mapped
Additional sequencing 
Clone: SGN-C46578 [cLEI-13-A16] Trace: SGN-T82427 EST: SGN-E268366 Direction: 5' Facility: TIGR
Clone: SGN-C177594 [TUS-26-P8] Trace: SGN-T182686 EST: SGN-E370072 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E370073Length: 593 bp (920 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E370073 [] (trimmed) GACTATTAAAAGAGGATCATACGATAAAGAAGCAAACTTACAAATATGTTACATCCAAACCCACCAAACAAAAAATAAATTATACCAAAGCTATA
TGTAAAATTTGGCACATAAAACAAACTCATATAGTAGTAACTTTTCAAAGTGCGGGTTTGATGATGGCATAGTTTGTGTATTTGCCTAATGGATC
TTCTTCACTTTTCAACATGCCATTGAGTTCCCTAACTAATATTTCCATTGCAAAAGCAGGCAAACATACAGGCACCACAATTCCATTTTCACCAT
TTTTGTTTTTAAATGGTATGTAAAAACTCGCCACACCAGGGATTGCTCCTACTCCTCCTTTAGCCGGTCCACCATACGCTGCTTTCCCCCATCCA
AAATCTACTTCTCCGAATCCCGCTCGAGTCACGTCTGACACCAGATAAGTCCGCACCACTGTGAAATGAGGCCTTCCTTTCATCACCATCAAATC
CGCTACGGATTTCATGTATTCTTCCGTCACGTCCGACTTAGCCTTCTTCACTAGCTCAAGAGCATATCCTAATGGATTTTTACACAATTTAGCTG
CGGTTGTGACTGCTACGGGGAAC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E370073] SGN-U578867 Tomato 200607 Build 2 30 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T182687 [Download][View] Facility Assigned ID: FA0AAD14DH04RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.971 Expected Error Rate: 0.0055 Quality Trim Threshold: 14.5