EST details — SGN-C177531

Search information 
Request: 177531Match: SGN-C177531
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C177531Clone name: TUS-26-M17
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C177531 is on microarray TOM1 spot ID 1-1-8.1.6.6 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C37629 [cLEG-42-K15] Trace: SGN-T72390 EST: SGN-E259629 Direction: 5' Facility: TIGR
Clone: SGN-C177531 [TUS-26-M17] Trace: SGN-T182312 EST: SGN-E368902 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E368903Length: 615 bp (909 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E368903 [] (trimmed) TGCAGTTCCGCATGCGGGGTCTGGGTAGGGGGTTGAGTGTAGGCAAACCTTACCCCTGCCTTGGCAGGTAGAGAGGCTGTTTCCAATAGACCGTC
GGCTCAGTGAAAACAAAAACACAACATTTATGAAGATATAAGCAGTAACAACAACAGGATAACTCTTAATTGTGACACAATATATTCTTATTAGC
CATATCGTAGCACCAGACTTTGAACCGTACTCCTGAATCCTAGAATTTGTGTAATGAAGAGTCCAACCTCTAGATCAACATCTGTATCAGATGCC
CACTTTCATAACATGAATGAGCTTAATAGAATTTTGTAAGTCTGTGAATAAAGTAGAAAACATGTATTTGTTGACTTTCTTCTCTACTTATCTAA
CCTTGCTGGGCTGAGACGCCATTTTCTATTTGACAATCTACTTTATTGTTAGTGACCTTGAACTGAAACCTACTGGAGTATTGGAGGTGAAACTT
GTTCAAGCAAAAGAGTTAACAAACAAGGACATCATTGGTAAATCTGATCCTTTTGCTGAGTTATATGTACGCCCTGTACGAGATAGAATGAAGAA
GAGCAAAACAATTAACAACGAACTGAATCCAATCTGGAATGAGCA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E368903] SGN-U585890 Tomato 200607 Build 2 3 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T182313 [Download][View] Facility Assigned ID: FA0AAD14AG09RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.968 Expected Error Rate: 0.0047 Quality Trim Threshold: 14.5