EST details — SGN-C177168

Search information 
Request: 177168Match: SGN-C177168
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C177168Clone name: TUS-25-N14
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C177168 is on microarray TOM1 spot ID 1-1-3.2.8.8 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C34219 [cLEG-30-C4] Trace: SGN-T69050 EST: SGN-E255324 Direction: 5' Facility: TIGR
Clone: SGN-C177168 [TUS-25-N14] Trace: SGN-T182165 EST: SGN-E369676 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E369677Length: 587 bp (930 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E369677 [] (trimmed) TATTCATACATTCAGAGCAAAAACCCAACTGCACGCATTGAACATGAAGCGACAACGTGAAAGATCGGTGAAGACCAGTTATTTTATTTCCAACA
GAGGGGAATCGACTACGAGAAAGCAATGGCTGCAATGATATAGGGTTTCTGCAGAGACGTTTTCAATGAACTTCCTGATGAATTTGGTGCTGAAG
TGAACCAGCTAATGAGTTGGAAACTTGAAGGATCTGTTGGTTAAAGCACTATTTCAAACTAGTCAATAAAAGCTAATTGCTAGTAGCTAGTGGTT
TTGTAATCTGTAAAGTTATATCACAAGACTTTGCATCATCAATACACATTTGTAAATAATGCATCAACGCATTATCTTCTACTTAATATCTTTGT
AATCCATCCTGCTTTTCCACGAGCTGAGGGTCTATGGGAAGCAACCTTTCTGCCTCTCAGCATACACTCTACCTTCTTCTGACTTCACTCGTAGG
ATCACACTGTGTATGTTGTTATCTTTGTAATTCATCCCAAAACTTTTGTAGATGGATCCCAAATTGATTGTATTAGAGATCAAAGAAATCAAGGT
TTTTATTTTTTAGCATT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E369677] SGN-U574526 Tomato 200607 Build 2 20 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T182166 [Download][View] Facility Assigned ID: FA0AAD13DG07RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.963 Expected Error Rate: 0.0099 Quality Trim Threshold: 12.5