EST details — SGN-C177129

Search information 
Request: 177129Match: SGN-C177129
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C177129Clone name: TUS-25-L23
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C177129 is on microarray TOM1 spot ID 1-1-2.4.8.11 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C29045 [cLEF-49-P7] Trace: SGN-T62613 EST: SGN-E249105 Direction: 5' Facility: TIGR
Clone: SGN-C177129 [TUS-25-L23] Trace: SGN-T182004 EST: SGN-E369051 Direction: 3' Facility: INRA
Clone: SGN-C177129 [TUS-25-L23] Trace: SGN-T182005 EST: SGN-E369052 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E378685Length: 1357 bp (untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E378685 [] (untrimmed)
CCTGGTCACTAACNGCCCTTTNNTANTCCCTATTACAGCCCGAAAGGGGGCGCTCTTAAAGCCCGCAAAATTAGGCGCTTTAAAAGGGCCCCTTT
TTTGGGTTTAAAAAAAAACTTATATACCATGCTCCTGGGAAACCCGTGATAACTCCCTGACACATCTCAACAACTATCTCCCCCAAAAACTTAAT
GTCCCCACCAGGAAGTTATTGCAGATGACAAATAGCCCTCACTGCCATTTGGGGGGGGTGGGGGGGTCCCATATAATATAACCAGGTCCCTCAGT
TCTAGCACGCTCCAAATAAATGATGATACCTACATCAACCCTGTTTGAATTGCATAAAAGGAGCTTGGATCCACTAGTTCTAGAACGTCCGCCAC
CGCCTATGGAGCTCTCATATTACCTATAGGGAGTCGTATTACAACGCCGCCGCGGATACGACAAACCAACACGCAGACCCTACGCAGACAGAACA
GCCACCACAATATATAGCACACCCCACCACCCCACCATCCCCTCCCACACTTCTCGTCCCACACCCCAACAACCAAATTCATATCCCCATGAACC
CGCCCTAACCTCTACCAACAACCCCAGGGGGGGGGGGGGGGAGGGTCATTTCAAAACACCAACACAAGCAGAAGCGATTCGCCTCTCCCCCGTGG
GGAGGGGAGAACAACACCGAGAAATCCTACATCAACCCCTAACGCCAAACCCCTGACAACTCACCTTAACCTACACCCCCCACCCCCAACCATCT
GCCCACAACCACCCACCACCCAACCAAGGAAGGGCCTGGGCGAAAAATGGGAGTGAGGCAAAGGGCGACGGCTGCTGATCACCTGACACATACCT
CACCCACTATAAATATTCATACGACGAACACAGGTCAACGAGTCAGATAAACTTGCTAAGACAAAACGCAATGGCACGCTGTGTTCCCCCGCCCT
CCCCTCAGCACCGCATAGCCGCATTAACGCCCGGCCCACGACGGTCACTGAGCTACAGTAAGCTCTCACACCCCCCCCTCCTCCTAGACAACTCC
GAATCTATAACCTCACACGCGAACCTTCCACTCCTACCGCCACTCCCCCACGCCCCGCTTCCCTCCAGGACACGGTGTGACTTCTGAATAATTCG
CGCACCGAAGTGGTCCTACAGAAGATACCGCACGCCAGTAACCACCCCTCCCCCCCTTCCGTTTTAAACTATTCGCTCACTATCTACCTATGACT
CAAGCAGTATGACATAAAAATAGAGGGCTTGGACGAAACCACCGCGTAGACCCCTCACTCCCCGCTACACACCCACAACAACGCCCGCGGTGGGC
TGAGTAGGAGAGATGGGTCAAGATGTA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
No current unigene builds incorporate this sequence
Chromatogram 
SGN-ID: SGN-T1437 [Download][View] Facility Assigned ID: TUS25L23.ab1
Submitter: Koni Sequencing Facility: Giov. Lab
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Problems: High expected error (low overall quality)
Sequence Entropy: 0.000 Expected Error Rate: 0.0220 Quality Trim Threshold: 14.5