EST details — SGN-C176957

Search information 
Request: 176957Match: SGN-C176957
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C176957Clone name: TUS-25-E19
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C176957 is on microarray TOM1 spot ID 1-1-6.1.8.10 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C28739 [cLEF-49-B13] Trace: SGN-T62406 EST: SGN-E248898 Direction: 5' Facility: TIGR
Clone: SGN-C176957 [TUS-25-E19] Trace: SGN-T181578 EST: SGN-E369716 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E369717Length: 669 bp (945 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E369717 [] (trimmed) CGCAAGTTCAACTGTTGCTTCTTAGACATATGCAGAGCATGAGAAATTTCTCCATGAGAATGTTCAGCTTAAGGAAACTTCTGGAGTAATTGGTT
CGAAAGATCATGCTTATGCACAAGAAAGTATCTGCAGATCACAGGATAATCCCACTGCTTGTCCTTCAGGTCAAGATGATAAGGTTTCAGAGACT
AATGTAAGAGATTCTACTAATGAGCCACAGATGAATTCTCATAATCTAGGAAATGCTGCTGAATCTGAAGAATGTGATCCTTCAAAAGGTTCTCA
CTTGGACGTTATGCAAAATGTTTGTGAATATCCAAGACCTTCTGCTCTAGATTTCGACATTCCCATCTTAGATGTGAAGTTCACAGCCAATGAAG
ACGGTGATTCCAAGTTCTCACTAGAAGTTCTTTTAGGTGACAAGACAGATGTTAATGTTGATGAAAGCACTAATAATGCTGTCACTAGTGAGGGA
ACAACTTCCACTGATATGAATGATGAAGAATTACTGAAGTGTTTTGCAGGCGATAGCAACACTCTGGTGGATTTTGGATTTTATGCTGCAGATAC
ATTCACTAATTCAGATGGACACAGTATTCCGAGTATATCCAGCAACCACGAGGTAGTCATCCGGTCTCATCTGAGACCTACTTTTTCCAACGTGT
ATAG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E369717] SGN-U565270 Tomato 200607 Build 2 8 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T181579 [Download][View] Facility Assigned ID: FA0AAD13AC10RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.965 Expected Error Rate: 0.0083 Quality Trim Threshold: 14.5