EST details — SGN-C176806

Search information 
Request: 176806Match: SGN-C176806
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C176806Clone name: TUS-24-O12
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C176806 is on microarray TOM1 spot ID 1-1-5.3.9.17 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C27921 [cLEF-46-A17] Trace: SGN-T61679 EST: SGN-E247268 Direction: 5' Facility: TIGR
Clone: SGN-C176806 [TUS-24-O12] Trace: SGN-T193110 EST: SGN-E391784 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E391785Length: 654 bp (844 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E391785 [] (trimmed) CTATTTTCACCGCCTCCTGTTTCTTTCAGTTTGCCTGAAGTTGCAGATCAGATTGGTCCTGAAGAACAAGCAGGTACGTGTAATCTTTTCATTGG
AGATTGGATTCCTGATCCAGATGGTCCTGTTTACACGGATGAGACATGCAAATTTATTGAAGACCATCAGAATTGTATGAAGAATGGCCGACCGG
ATAATGGTTATCTTTACTGGAGGTGGAATCCACGAAATTGCAAGTTACCTCGGTTCAATCCACTTAAGTTTCTTCAATTTATGAGAAATAAAACA
TGGGCATTAATTGGTGATTCAATATCAAGGAACCATGTCCAATCATTTCTTTGCGTACTCTCAAAGGTAGACGAAGCTGTTGAAGTATACCATGA
TAAGGAGTACCGATCCAGGAGATGGTTATTCCCCTCGTACAACTTCACCGTTTCAGTAATTTGGTCCCCCTTTCTGGCGAAGGCGGATATATTTG
AAGACTACAATGGAGTTTCCACATCTGAGATTGAACTTCATATCGACAAACTTGATACTAGTTGGACAGATCAGTTTAAGGATTTTGACTATATG
ATATTTGCTAATGGTGAGTGGTATGTCAAAACTGCAATCTACTATGAAAACGATACTGTACTGGGCTGTTCCTACTGTCCCCAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E391785] SGN-U578564 Tomato 200607 Build 2 12 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T193111 [Download][View] Facility Assigned ID: FA0AAD12BH06RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.973 Expected Error Rate: 0.0027 Quality Trim Threshold: 14.5