EST details — SGN-C176801

Search information 
Request: 176801Match: SGN-C176801
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C176801Clone name: TUS-24-O7
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C176801 is on microarray TOM1 spot ID 1-1-2.3.9.13 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C27908 [cLEF-45-P19] Trace: SGN-T61322 EST: SGN-E246587 Direction: 5' Facility: TIGR
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Sequence 
Sequence Id: SGN-E391897Length: 580 bp (841 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E391897 [] (trimmed) CAATATTCTATTTGTTTCACTATGGGGCATTTTATCAAGCAAGTGGTGTGCATTCTGTTCTTGGTGATTTCAACTCCGTCTGTGCAAATTGAAGC
TAGAAATAGCAAGTTTATGATAATTCCTACATCTCCTTCACCTGCTCCTACTCCGATTTCTAATGAAATTAGTTTCCCTCCTTTTTCATCGTTAA
GTCCAACACCAGCACCAGCACCAACACCGGACTTTAATGATTTTGGATTTCCTCCTTTGTCGTTTTTAAGTCCAACACCATCACCGATAGAGGGT
GATCAAGATCCTGGTTTGCCAACACCGGCGGGGGCACCGGAGGAAGGTGATATTGAAGCACCAGCACCACTTTTGAGTGACACTCCTTATGGACT
TTATGGTCCTCATGCTCAGGAAGTTCCTTCTACTACTCTCACAAATTTTGATGATGTAGAAAAGGAATTACAAGGTGCCCGTTTCAACACGGACG
AGTCCTACAATAACAATAACAACAACAACAATAACAATGGATACTCTGATAATTACAACTACGATAGCCACTCGAAGAATTACAACAACAATGAT
GGTCACTCGG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E391897] SGN-U577100 Tomato 200607 Build 2 16 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T193223 [Download][View] Facility Assigned ID: FA0AAD12AH04RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.975 Expected Error Rate: 0.0029 Quality Trim Threshold: 14.5