EST details — SGN-C176608

Search information 
Request: 176608Match: SGN-C176608
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C176608Clone name: TUS-24-G6
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C176608 is on microarray TOM1 spot ID 1-1-3.3.9.11 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C27101 [cLEF-42-I7] Trace: SGN-T60718 EST: SGN-E247674 Direction: 5' Facility: TIGR
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Sequence 
Sequence Id: SGN-E391747Length: 586 bp (852 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E391747 [] (trimmed) GTTTTGGATAATGAAGCTCTTTATGACATTTGCTTCCGAACTCTCAAACTTACTACTCCGAGCTTTGGGGACCTAAACCATTTGATTTCTGCCAC
CATGAGTGGTGTAACTTGCTGTCTCCGTTTCCCTGGTCAACTCAACTCTGATCTCCGCAAGCTTGCTGTTAACCTCATCCCATTCCCTCGGTTGC
ATTTCTTCATGGTTGGATTTGCTCCGCTCACTTCTCGTGGGTCGCAGCAATATCGAGCATTGACTGTTCCTGAGCTAACACAGCAGATGTGGGAT
GCAAAGAATATGATGTGTGCTGCTGATCCTCGTCATGGTCGATATTTGACTGCTTCAGCTATGTTCCGTGGAAAGATGAGCACCAAGGAAGTCGA
TGAACAGATGATTAATGTTCAGAACAAGAACTCTTCCTATTTTGTTGAGTGGATCCCTAACAATGTTAAGTCAACAGTCTGTGACATCCCTCCTA
CTGGTCTGAAGATGGCCTCAACTTTCATTGGTAACTCCACTTCGATTCAGGAGATGTTCGGTAAGGTCCGTGAGCAATTTACAGCTATGTTCCAA
AGAAAGGCTTTCTTGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E391747] SGN-U564023 Tomato 200607 Build 2 101 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T193073 [Download][View] Facility Assigned ID: FA0AAD12BD03RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.973 Expected Error Rate: 0.0021 Quality Trim Threshold: 14.5