EST details — SGN-C176376

Search information 
Request: 176376Match: SGN-C176376
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C176376Clone name: TUS-23-M14
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C176376 is on microarray TOM1 spot ID 1-1-3.1.10.2 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C26616 [cLEF-41-B1] Trace: SGN-T60446 EST: SGN-E247031 Direction: 5' Facility: TIGR
Clone: SGN-C176376 [TUS-23-M14] Trace: SGN-T181244 EST: SGN-E369206 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E369207Length: 675 bp (935 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E369207 [] (trimmed) ATCATGAGCCCTTGTGGATATGAAGCTACTGTTTGCTGGCTTGAGATGATTATATGCAACTTAATTTTTAGAAGAAAAGTTTTGTATCCTGGCAA
TTGCTCGAGATTCTAATTTTTTTATGCTACAGGGAGCTTCTGGTGTTGCCGCAAGCACATAATGGCGTCCAAGTATCATGGACCAATCAACAGAA
CACGGCGACCGATCTCTATATTAATTGTAATTGGTCTTTGTTGTTTCTGTTATCTAATAGGAATTTGGCAGAAAAGTGGATCCGGAAAGGGAGAT
AAATTAGCACTACAAGTGACTGAGCAAACTGCTGACTGCAATGTTTTTCCACAAACCACTCTGGATTTTGAGTCACACCATAATTATGTGGAAAC
GGTTGAAACTTCAGAACTAACAGTTAAAAGATTCAAATCATGTGAAGCTAAATACACTGACTATACTCCCTGCCATGAACAAGACCGAGCTATGA
AATTCCCAAGGGAAGATATGATATATAGAGAAAGGCATTGCCCTCCAGATGATGAAAAGCTTCGTTGTCTGATTCTAGCACCCAAAGGATACACA
ACTCCATTTCCATGGCCCANAAGCCGTGATTATGCCTACTATGCTAATGTTCCTTACAAACACTTGACAGTTGAGAAGGCAGTCCAGAACTGGGT
GCAGTTTCAG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E369207] SGN-U583160 Tomato 200607 Build 2 95 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T181245 [Download][View] Facility Assigned ID: FA0AAD11BG07RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.969 Expected Error Rate: 0.0074 Quality Trim Threshold: 14.5