EST details — SGN-C176259

Search information 
Request: 176259Match: SGN-C176259
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C176259Clone name: TUS-23-H17
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C176259 is on microarray TOM1 spot ID 1-1-8.4.10.4 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C21708 [cLED-34-O2] Trace: SGN-T57384 EST: SGN-E243610 Direction: 5' Facility: TIGR
Clone: SGN-C176259 [TUS-23-H17] Trace: SGN-T181364 EST: SGN-E368437 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E368438Length: 645 bp (925 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E368438 [] (trimmed) AAGTTAAAACTCAATGGAATAGATGCCTGAAGCAAAAATATAATCCCATACAATTGTCAAAATTGACAAGTCTCATTCTACTAAGCATGCAAAAC
TGAGGTTTCTACCTAGTAGCAAAAGAAAAACAATATTAATAGAAAACCTTAAGGCAACAAGGATTCAAAGTTCTTCTACAAATTCACTAATCGTC
GTCTTCCTCATCGTCATCATTTCCACCAGCTGCGTTCAAAGCATTGAGTCTCTCGATCAACTTAGCTTTCCTCTCTTCATAAGTCAGCTTCTTAA
GGTTGTACCTCTTGTGTGTCTTGGGAGGTTGCTTTCCAGACTTCTTTGGACTTGGGTCTGCGCGTATGGCAGCATGAACCTTTTTGTACATCTCC
TCAAGATTGTCTGCCTCAAGACCCGCCTTGATGTATAAGCTGAAGTGTGTCTGATATTTCTCAGGTTCATCTTCCATCAAAGTATTCATATAAGC
AGCAACGTGGCCACCATAGATATACTTGCGGTGAACTTCTGCATCGAGTTGCTTAGAGTCCTTGCTGTATCCAGCAAACCTCTTCTCGCTATGAG
GGATGTCAATCCCACCATCCAATGCACCCTTGAGAGCACCAAACACACGGTTTCCTTGTATAGTTTTTAAGAGGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E368438] SGN-U578255 Tomato 200607 Build 2 105 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T181365 [Download][View] Facility Assigned ID: FA0AAD11CD09RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.968 Expected Error Rate: 0.0006 Quality Trim Threshold: 14.5