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EST details — SGN-C176171

Search information 
Request: 176171Match: SGN-C176171
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C176171Clone name: TUS-23-E1
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C176171 is on microarray TOM1 spot ID 1-1-8.1.11.17 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C20873 [cLED-30-O6] Trace: SGN-T56462 EST: SGN-E242532 Direction: 5' Facility: TIGR
Clone: SGN-C176171 [TUS-23-E1] Trace: SGN-T180966 EST: SGN-E369392 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E369393Length: 738 bp (933 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E369393 [] (trimmed) CAGGTATACCCAGCATCAACCACTTCTATTCCAAACTATGGAGAACATCACCAGGGGTCGACTGAGAGATGTGGACTACCCTTATGTAGGAAATC
ACTTTCAGCAAGCAAGGCCACAGGAAGTGGTGATTTTCGTTGTTGGTGGGACAACATATGAAGAGTCACGTTCGGTTGCTCTACAGAACTCTACG
AACTCTGGCATTCGTTTTATACTTGGTGGTTCTTCCCTTCTAAATTCTAAAAGATTCTTGAAGGACCTTGAAGAAGCTCAGAGAATCGCTCGTAT
AAGCACCAATATGCTTTGAATTTTGGACTCTACAGTACCTTGTGAAAATCTGAAAATATAGAATCACAGTCTAAATGGGGATACTTGGATTCTGC
AGAAGTACATAACGAGCTGAGTTTGCTGATCAAAATTCCCATAAATACATTGTGTAGCCACTGTAATCATCGTCTTTCATAGCTTCCGCGTTCTG
CCCAAGTGAGACGGTTTTGAGACCACCTCATCTGTGTGCCACTTTTCATGTCTAGATTTGTTGTGTACATGTAGTGTTCTCATATTCCTAAGATA
CTTCTCTTGACTTGTAGTCTTGTAGCATATCTGTTCTCATGTCCCGACTGTTATTTGGAATCACATAAAGCCTACATATGGTACGGTACATCTTA
CAGTAGTTTCTGTGAAGGTAGTTATTTAATGTTATGTTTATTTGTCCCCTTTGATTTATTTTAAGTAGCCATT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E369393] SGN-U575411 Tomato 200607 Build 2 6 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T180967 [Download][View] Facility Assigned ID: FA0AAD11AC01RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.970 Expected Error Rate: 0.0064 Quality Trim Threshold: 14.5