EST details — SGN-C175655

Search information 
Request: 175655Match: SGN-C175655
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C175655Clone name: TUS-21-O13
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175655 is on microarray TOM1 spot ID 1-1-4.3.13.17 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C15688 [cLED-13-K19] Trace: SGN-T51634 EST: SGN-E236356 Direction: 5' Facility: TIGR
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Sequence 
Sequence Id: SGN-E377106Length: 471 bp (934 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E377106 [] (trimmed) CACACGCTGGCAAGAAAAGTAGAGATAAAATTTCTTTCTACTACATGGTTATACAAATTCAATTACGATAAAATAAATAAAAGACCAAAAGTTTA
AAATCTCTTCCCCATTGAAATACTTAGAAGATTCCCCGGATAAACGGGCAAAGCCCGAAACAATCCCACAAGAACCGTTATAACTACTTGCCATA
TCCACCGGTGCGGCCTTCGTATAAACCGCAGCGCAGCCTGCCGTACTTTGAGACGGCGCCGCCGCATTTTTAACCCTAACAGAAAAATTAATTAT
CCCATTCTTCTCCCCCTTTTCATTCCTAAGCCTATAACTCAAAAAATGCAAATAATCTTCGGGCAAAATTCCTCCAATAAAATCCGACGTCGGAA
CTTTTGCGATCCCAACGGTTTTGATCCCGGAGGAATTTATACATTGAACCTGCACCGTTAGATGCCGCGCATGCATTGGCAAATCAACGAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E377106] SGN-U594676 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T190297 [Download][View] Facility Assigned ID: FA0AAD9AH07FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.951 Expected Error Rate: 0.0366 Quality Trim Threshold: 12.5