EST details — SGN-C1754

Search information 
Request: 1754Match: SGN-C1754
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C1754Clone name: cLEC-13-M24
cartOrder Clone
Library Name: cLECOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: combined undifferentiated and shooting callus
Development Stage: 7-10 days post germination

Microarray: Alias clone SGN-C184961 is on microarray TOM1: SGN-S1-1-2.3.12.13
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C184961 [TUS-46-C7] Trace: SGN-T198888 EST: SGN-E397562 Direction: 3' Facility: INRA
Clone: SGN-C184961 [TUS-46-C7] Trace: SGN-T198889 EST: SGN-E397563 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E204208Length: 180 bp (1048 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E204208 [] (trimmed) CCTAGCACCACCAGCAGCAGCAGCAGCACTAGGAGGTTCTTGATTACTAGCAATGGGTCTTCTTGCCGGCGGCGCCCCAATATTTCCACTGAAGA
CCAACCCTGTTCCTCTTCAGCCTGTTATCAAGGGGCAGTGCAGTCTTATGGTCTGCAGAGGCAACGAGTACAATTAAATGGGATA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E204208] SGN-U568015 Tomato 200607 Build 2 13 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T25961 [Download][View] Facility Assigned ID: TCABX84THB
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.971 Expected Error Rate: 0.0052 Quality Trim Threshold: 14.5