EST details — SGN-C175385

Search information 
Request: 175385Match: SGN-C175385
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C175385Clone name: TUS-21-D7
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175385 is on microarray TOM1 spot ID 1-1-2.4.13.10 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C15168 [cLED-11-C14] Trace: SGN-T51492 EST: SGN-E235482 Direction: 5' Facility: TIGR
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Sequence 
Sequence Id: SGN-E377817Length: 648 bp (927 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E377817 [] (trimmed) GAAAAATGCTCTAATTTTGTACAGGGTTAATGTTGATAAAGAATCAGATCTTGAAAAAATGATTGAGGATATGAAATCATCAAATATGACTACTC
TTAATCTCTCACATAATGAATTGGTTGTAGACCATCTAAAACATTTGGTTGGTGGCTCAGCAAATATCAGTGATGAAATTTTCGGTGAATTTATT
GTACCTGAGAAGGCTGAAACTTTAAAAACATTCTTAGACGCTTTCTCCCCTCGTTGGAATATAACTTTATGCCGTTACCGTAATCAGGGAGATAT
AAATGCAAGTTTGTTGATGGGATTCCAAGTTCCTCAAGCTGAGATGGATGAGTTCAAAAATCAAGCTGATAAGCTTGGTTATCCATATGAACTTG
ATAATTATAATGAGGCTTTTAACCTTGTAGTAAGTGAGTGAAGAAATAAAAAATTTGTTGTTCTAAGTTTAAATTATTGAAAATCCTAAAAAAAA
TAAAATAATAATCGTGTCGTACCAATCTACTTAGTAAGGAATAATTGATGAATTAACTTGTTATAAGTTAATTTCATATTGTATGAATAATAAGA
TGCATGTATCCAATGTAATGTAATGGCTTTTTAAGTTTTATTTAAAAATAATTTATTATTGCCAATTACTTATTCCAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E377817] SGN-U570558 Tomato 200607 Build 2 227 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T190579 [Download][View] Facility Assigned ID: FA0AAD9CB04RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.928 Expected Error Rate: 0.0015 Quality Trim Threshold: 14.5