EST details — SGN-C1753

Search information 
Request: 1753Match: SGN-C1753
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C1753Clone name: cLEC-13-M22
cartOrder Clone
Library Name: cLECOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: combined undifferentiated and shooting callus
Development Stage: 7-10 days post germination

Microarray: Alias clone SGN-C173167 is on microarray TOM1: SGN-S1-1-4.3.19.1
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C173167 [TUS-15-G21] Trace: SGN-T188581 EST: SGN-E374937 Direction: 3' Facility: INRA
Clone: SGN-C173167 [TUS-15-G21] Trace: SGN-T188582 EST: SGN-E374938 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E204207Length: 143 bp (990 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E204207 [] (trimmed) CTTCCGTCGTCCTAAAGAAATCGAAACTACCGAAAATGTCCCTGCTTTTGTAGACACTTTTTACAATCTCGTTACCGATATTTACGAATGGGGTT
GGGGNCAATCTTTTCATTTTTNCCCTTCTATCCCTGGAAAATCTGATC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E204207] SGN-U578173 Tomato 200607 Build 2 22 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T25960 [Download][View] Facility Assigned ID: TCABX83THB
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.971 Expected Error Rate: 0.0322 Quality Trim Threshold: 14.5