EST details — SGN-C17524

Search information 
Request: 17524Match: SGN-C17524
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C17524Clone name: cLED-19-P16
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: Alias clone SGN-C175967 is on microarray TOM1: SGN-S1-1-4.4.11.10
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C175967 [TUS-22-L13] Trace: SGN-T180713 EST: SGN-E367964 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E237594Length: 522 bp (858 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E237594 [] (trimmed) GCTCGCTTGTGGGGAAGACCTAGGCCTAATTCCCTCCTGTGTTCATCCTGTTATGCAAGAACTGGGCTTAGTAGGCCTACGCATTCAACGCATGC
CAAGTGAACCTGATCTAGAATTTGATATTCCTTCTCAATACAACTACATGACGGTTTGTGCTCCATCATGCCATGACTGTTCTACTCTACGTGCT
TGGTGGGAGGAAGATGAAGAGAGAAGGCACCGCTTTTTTCAAGCAGTGATGGGATCTGATGAGTTGCCACCTGATCAATGCACTCCTGAAATTGT
GCACTTTGTCTTGCGACAGCATGTTGAAGCCCCATCAATGTGGTCAATATTTCCCCTCCAGGTGTACACGTGACAATGGAGTCCTTGCTTAATGA
TAAAGACCTCACAAAAACAATAAAGGATCTCGTTCATGGGAGTGGAAGGTTTTACCCTCAGAAAGATCTGGAATCAGGTCACACAATTGGTGAAG
GATCAGCAAAGCTGCAGCTACAGAGTGAACACCCTTCACAAACACAG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E237594] SGN-U576822 Tomato 200607 Build 2 10 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T53508 [Download][View] Facility Assigned ID: TOVCX92TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.983 Expected Error Rate: 0.0104 Quality Trim Threshold: 14.5