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EST details — SGN-C17522

Search information 
Request: 17522Match: SGN-C17522
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C17522Clone name: cLED-19-P14
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: Alias clone SGN-C184964 is on microarray TOM1: SGN-S1-1-7.3.12.17
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C184964 [TUS-46-C10] Trace: SGN-T198983 EST: SGN-E397657 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E237593Length: 527 bp (847 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E237593 [] (trimmed) GACCCAGAAACGAAGACGAGGCAATGGGATTGACAATATGGAGACTTCCGGGAGGTGGGTTCGCCGTAGGAAGATTTTCCGGTGGAAGAAGAGGA
GCTGAGAGAGAGCTTCCAGTAGTGTATACAGAAATGGACGGTGGATTTAACAATGGGGTACCTAGAAGAATAGCTTGGAGATCAAGAAGAAGCAA
CACAGGTCGAAATGGCAACGGAATAAGCCGAATTTTCAACAACTTCACATCATTTTTCCGGCGATTAACACCATCTTCTCAACATCGATCTCTAT
CCATACATTCCAGTAGTTCAGAATCATCCGGTTCTGGTTCTGGATCTGCTGTATTCAGGAGTCGAAGTGTATCTTCAAGCACTTCAATATTCAGT
AGGTATTTGAGAAGAAGCAGAAGAAATTGGGTACCTGAAGAACGTAATGGAGTAACAAGATGGTAATTACTTAGTCGGAAAACGCCAATTTTCAA
TTATTATTTTTATTAGGCAGTCGACTAGAAACAGAAGACGATAACCCCCGAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E237593] SGN-U567466 Tomato 200607 Build 2 39 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T53507 [Download][View] Facility Assigned ID: TOVCX91TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.971 Expected Error Rate: 0.0133 Quality Trim Threshold: 14.5