EST details — SGN-C175118

Search information 
Request: 175118Match: SGN-C175118
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C175118Clone name: TUS-20-I4
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175118 is on microarray TOM1 spot ID 1-1-5.1.14.21 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C23971 [cLED-6-N18] Trace: SGN-T50198 EST: SGN-E233212 Direction: 5' Facility: TIGR
Clone: SGN-C175118 [TUS-20-I4] Trace: SGN-T189843 EST: SGN-E377632 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E377633Length: 732 bp (913 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E377633 [] (trimmed) AAAACAAAGTTTTTTACATTGAAATTTCAAGAATTCATTCCCAAAGCTTGAAAAACACCATTCTTGAATCACACAAAATCACAAAAGAATGAGTC
TTTACATTGTATTTCAAGAATTCCCAAAGCTTTGAAATCACCATTCTTGAAAAAAGTTCCAAAGAAAAAAATATATAAAAATTGAGTCTTTACAT
TGAATTTCAAGAATTTCCCAATAAAAGATGCCACCTTTTATTGGATCTCATCCTCTTTCATCTGGTTTTTCAAGAAACTCCATTGATTCATCTTC
AAATATTGTCACCATTGATGTAGGTGGTCATCTTTTTCAAACAACCAAACAAACCCTAAAGCAATCAGGTTCAAAATCAATACTTTCTGAAATTT
CAAATCTTGATGGTTCCATTCCTTTCATCGATAGAGATCCAGAAATGTTCTCAATCTTGCTTTCCCTTTTAAGAACTGGGAATCTCCCTTCAAAA
GCCAAAACTTTTGATATTCAAGATTTGGTTTTTGAATCTCAGTTTTATGGTGTTGAGCATCTGTTATTGAATTCCCATTCTAACCCTTCTCAGTT
TGAGCCTTTTGATCTTGAAAAATCTTTGATTTTGCCTTTAAGTGGTAGGGATTCACCTACTGCTATCTCAACAACTCAATTAGGGTCAGTTCAGG
TAGCTCATGGTTGTAAAATCACTTCATTTGATTGGTCATTAAAGAGAAAATCAACCATTTTAACACA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E377633] SGN-U567212 Tomato 200607 Build 2 9 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T189844 [Download][View] Facility Assigned ID: FA0AAD8BE02RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.913 Expected Error Rate: 0.0023 Quality Trim Threshold: 14.5