EST details — SGN-C175092
| Search information |
| Request: 175092 | Match: SGN-C175092 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C175092 | Clone name: TUS-20-H2 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C175092 is on microarray TOM1 spot ID 1-1-7.4.14.20 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C23943 [cLED-6-M14] | Trace: SGN-T50242 | EST: SGN-E233256 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C175092 [TUS-20-H2] | Trace: SGN-T190121 | EST: SGN-E377899 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E378670 | Length: 555 bp (1188 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E378670 [] (trimmed)
GTTTGTTGACACGTACAAAACCTTCACCATTCCAGACAAGGATATTTTGGTTCTGATCAAGGAGAACTTCGACTTCAGGCCTGGAATGATGTCCA
TTAACCTCGACTTGAAGAGAGGAGGCAACTTCAGGTACCAGAAGACTGCTGCTTATGGTCACTTCGGCCGTGATGACGCTGACTTCACCTGGGAG
ACTGTTAAGGCCCTCAAGCCTAAAGCTTGAGTGCAAGTTCCCACTCACAACTTTGCGTACCAATATTCTTGTGCCTATTATTCTTATTGCGGACC
AAATAAAGAAGCTTCATTGATTGAGTAAATTGATATCCTATTTTTACATTTAAGGCGCTATCGAGTGGAGGGAGACCAAAGCAAGTGTCTACATA
CTTTCATGGATTCTAAGAGCTCCAAGCAATTGATACTGTTGATTTTTCTTTTTTTTTTTTTTGGCAGACTTTATTTCCAGGGAACCCGGGGGGGT
CATTTCGGAAAACCCCCCCAAAAAAAAAATTCTTTGGGCTTTGGGGTCCTTTTACCAAGGGGAAAATGCCCCTTGTTTTT
TTAACCTCGACTTGAAGAGAGGAGGCAACTTCAGGTACCAGAAGACTGCTGCTTATGGTCACTTCGGCCGTGATGACGCTGACTTCACCTGGGAG
ACTGTTAAGGCCCTCAAGCCTAAAGCTTGAGTGCAAGTTCCCACTCACAACTTTGCGTACCAATATTCTTGTGCCTATTATTCTTATTGCGGACC
AAATAAAGAAGCTTCATTGATTGAGTAAATTGATATCCTATTTTTACATTTAAGGCGCTATCGAGTGGAGGGAGACCAAAGCAAGTGTCTACATA
CTTTCATGGATTCTAAGAGCTCCAAGCAATTGATACTGTTGATTTTTCTTTTTTTTTTTTTTGGCAGACTTTATTTCCAGGGAACCCGGGGGGGT
CATTTCGGAAAACCCCCCCAAAAAAAAAATTCTTTGGGCTTTGGGGTCCTTTTACCAAGGGGAAAATGCCCCTTGTTTTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E378670] | SGN-U580893 | Tomato 200607 | Build 2 | 101 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T1344 [Download][View] | Facility Assigned ID: TUS20H2.ab1 |
| Submitter: Koni | Sequencing Facility: Giov. Lab |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.975 | Expected Error Rate: 0.0065 | Quality Trim Threshold: 14.5 |
Working
