EST details — SGN-C174388

Search information 
Request: 174388Match: SGN-C174388
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C174388Clone name: TUS-18-J18
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C174388 is on microarray TOM1 spot ID 1-1-7.2.15.2 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C22982 [cLED-4-C5] Trace: SGN-T49378 EST: SGN-E231609 Direction: 5' Facility: TIGR
Clone: SGN-C174388 [TUS-18-J18] Trace: SGN-T197353 EST: SGN-E396027 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E396028Length: 396 bp (922 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E396028 [] (trimmed) GGGCAGCGGAGCCTCACGTTTTGTTTACGAAGATGCAGCAAAAATATGAAGAAGATGATGATGATGATGATGACGACGACGAAGCAGGAGAATAA
GATGAGGATGAATGGGGTATTGAGATGGATGTTGAAGAGGAGGAAGGTGAGACACTGTGCGGCATATGTGAGGGGAAGTATGCGAAGGATGAGTT
TTGGATATGTTGCGATCATTGTGAAACGTGGTTCCTCGGCCAGTGTGTTAAGATCACCGCTGCCACAGCTGAGTATGTGAAGCAGTACGAGTGCC
CGCCTTGCGGCAGCATCAGAGCCCGGATTCTTTTTAGAGAATACAGTTCATCAACGGTTCTCTTGCTGCGGACTGATCTATTCATGATGTTTTGC
TTCAATGTCCGATTTA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E396028] SGN-U591699 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T197354 [Download][View] Facility Assigned ID: FA0AAD6DE09RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.958 Expected Error Rate: 0.0206 Quality Trim Threshold: 14.5