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EST details — SGN-C174034

Search information 
Request: 174034Match: SGN-C174034
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C174034Clone name: TUS-17-K24
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C174034 is on microarray TOM1 spot ID 1-1-1.3.17.8 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C6609 [cLEC-35-P13] Trace: SGN-T30711 EST: SGN-E210363 Direction: 5' Facility: TIGR
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E395700Length: 649 bp (831 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E395700 [] (trimmed) CGGAGGCTGGTCTTCTCTCAATGGCAAATAGTGGTCCTAATACAAATGGATCCCAGTTCTTCATTATATTTAAGAGAACTCCCCATCTCGACGGG
AAGCATGTTGTTTTTGGAAAAGTTGTAAAGGGAATGGATTTAGTGAAGAAAATTGAACAGCTGGGAACAGACAGTGGGAAGCCATCTGGGCTTGT
GAAAATTGTGGATTGTGGCGAACTGTCTGAGAAGAAAAGTAATGATACACCCAAAGCAGAGAAAGGGAAAAATAAGAAGTCCGCGAGAGCTCTTT
CCTCTGATGATGATTCAGACAGTCAAGAAAAGGGGAAAAGCAAATCATCCACCAATAGAAGGAAAAAGAAAAAGAGGAGATACTCTTCATCTGAT
TCTTACAGTTCTGAGACAGATACTGATTCCTCTTCAGACTCTGATTCAGATTCTAAGCTGGACTCCTATTCTTCTAGTTCTTCAGGTGATGAAAG
GCGTAAGAAGAGGAAGAGGTCAACTAAGAAAGAAAGGAGTCGACATGGGAAGAAAAAAGGTAGAAAAAGCACGAGCAGAAGAGTTGATCCAAATA
AAAGATCGAGACGCAAGTGGAGCTCTGAGAGTTCTAGTGACACAGACAGTCAGAGCATGAACAACAGCAGCAGCGGTGA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E395700] SGN-U571222 Tomato 200607 Build 2 5 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T197026 [Download][View] Facility Assigned ID: FA0AAD5BF12FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.941 Expected Error Rate: 0.0047 Quality Trim Threshold: 14.5