EST details — SGN-C173844

Search information 
Request: 173844Match: SGN-C173844
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C173844Clone name: TUS-17-D2
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C173844 is on microarray TOM1 spot ID 1-1-7.4.18.19 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C5684 [cLEC-32-K24] Trace: SGN-T29985 EST: SGN-E207772 Direction: 5' Facility: TIGR
Clone: SGN-C173844 [TUS-17-D2] Trace: SGN-T197062 EST: SGN-E395736 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E395737Length: 717 bp (843 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E395737 [] (trimmed) CATCTTCCTATAAGTGTTCTTAATGGCTTTATGCAATATTTTTCCTTTTGCCTTCATCATCCTTTCTTGTTCTTGTTATCTGATATCGGGCCAAC
GTTTCGATTACCCCACTGCAAACCTTTCTACAACTTGGATCAACAGTGTTTCTGCACCTCATTCAGTGGATTTCACTGATGGCTCAAGAGTTAGG
GCTATACTACTCAGAGGAACTTTTGGTCCAAAATATGCTTGTGGTTTCTACTGTAATGGCAAATGTGATACTTACCTCTTTGCCATTTTCATCGT
GCAAACTAACAGCGCGTCCCAAATTACTTCTCCATCGATTGGATTCCCACAGGTTGTTTGGTCTGCTAACCGGAATAATCCTGTTAAGATCAATT
CAACTTTGCAGTTTACAGCACAAGGAGACTTGGTGCTTAGAAATGCTGATGGTAGTTTGGCTTGGTCAACTAACACTGCTGGAAAATCTGTTGCT
GGTTTAAGCTTGACCGATGAAGGGAATCTTGTTCTGTTTGATTCGAAGAATGCAACTGTTTGGCAATCGTTTGATCACCCGACTGATGCTTTAGT
TCCAGGGCAGAAGTTAGTATCCGGGATGAAACTAACAGCAAGTGTTTCANCAACAAACTGGACTAAAGGAGGTTTGTTTTCCCTCTCTGCTATGG
ATAATGGTTTGGTTGCTTTCATAGAGTCAAAATCTACCCAAACATACTTTGA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E395737] SGN-U570753 Tomato 200607 Build 2 80 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T197063 [Download][View] Facility Assigned ID: FA0AAD5DB01RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.975 Expected Error Rate: 0.0069 Quality Trim Threshold: 14.5