EST details — SGN-C138359

Search information 
Request: 138359Match: SGN-C138359
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C138359Clone name: cTOE-3-P4
cartOrder Clone
Library Name: cTOEOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Crown gall
Development Stage: crown galls from full-grown plants (4-8 wks old)

Microarray: Alias clone SGN-C184564 is on microarray TOM1: SGN-S1-1-7.2.14.15
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C184564 [TUS-45-B18] Trace: SGN-T198773 EST: SGN-E397447 Direction: 3' Facility: INRA
Clone: SGN-C184564 [TUS-45-B18] Trace: SGN-T198774 EST: SGN-E397448 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E334920Length: 473 bp (1001 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E334920 [] (trimmed) GAAATAATTCTGAACGCCTGAATATCCCTGAGGCCGACGAGCTCGACCCCGTCTCGTCGTCTATCAACTTACGTCACCGTTCATAGCTTCTGGAA
CCCTAGTATAATCGACATGGTCGAGGTTGAGGCTTCTACACCTGATCTCAACGACAAAGCCTCATCTCCTCACCACACAATGACAATGGTGCCTA
CTGAAGGAGAATTTTCAATAGGAAAGAGGAAGGATCAAGGTATTAGTGAACCTGAAGGGAGTAGAAAAAAGAAGAAAAAACAAGTAGCCACTCCT
CGTCCTGCTTGCTCTTGGGTGCACTTCAGCCGTGACTTTATTAAAGAGTATAGTGCTACACATCCTGAATCTTCAGGCCTGAAAGTTGCCACAAA
GGCAGCATCAGATGCATGGAAGCTGATGGGTCCTGAGGAGAAGGCAAAGTACACTACTCGTGCTCGTGAAGTGTGGGATAAGTACCTGAGCTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E334920] SGN-U574095 Tomato 200607 Build 2 5 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T148042 [Download][View] Facility Assigned ID: TAIAL86TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.974 Expected Error Rate: 0.0116 Quality Trim Threshold: 14.5