EST details — SGN-C110360
| Search information |
| Request: 110360 | Match: SGN-C110360 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C110360 | Clone name: cLPT-4-J11 |
| ||
| Library Name: cLPT | Organism: Solanum pennellii (formerly Lycopersicon pennellii) |
Tissue: leaf trichomes
Development Stage: 4-8 weeks old
Microarray: Alias clone SGN-C183440 is on microarray TOM1: SGN-S1-1-3.3.1.6
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C183440 [TUS-42-C22] | Trace: SGN-T196012 | EST: SGN-E394686 | Direction: 5' | Facility: INRA |
| Clone: SGN-C183440 [TUS-42-C22] | Trace: SGN-T196012 | EST: SGN-E399571 | Direction: 5' | Facility: INRA |
| Clone: SGN-C183440 [TUS-42-C22] | Trace: SGN-T196128 | EST: SGN-E394802 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183440 [TUS-42-C22] | Trace: SGN-T200281 | EST: SGN-E399235 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E364767 | Length: 585 bp (882 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E364767 [] (trimmed)
TCTTTTTCTCTCTATGAAACAACACTGCTTCAACAGTTCTACTTTTTCTTCATAAGAGAAATTTCTGTTCTTGAAATTAAAGTGGCATTGGAGCT
CAGAAGAGAAAGAAAAAGGTGTGTATTTGTACATTAAGCAGCATTGGTGTAAACAAGAGTAGTTCTATTGGATGCAATGATGAAGAAAGTAGTAT
CATGGTTGTTGTTTTTATCGATCGTTGCTTCCTTATGGGTTGTTGATGGTTATATTGAATGTCCTTGTGATGATAGTGATGCATTTTTTAGCATG
GAAACAATGTTATTTGTTCAAAAAGCCGGTGATCTCGGTATAGCAGTGGCCTATTTTTCCATCCCAATCGAGATCATCTACTTCGTTTCCTGTTC
TAGTTTTCCGTTCAAATGGGTGCTCTTTCAATTCGGAGCATTCATTGTACTTTGTGGTTTAACACATTTTCTCACCTTCTTAACTCATTTTGGCA
AATACACATTTCACCTTATTCTTGCCCTTATTGTTTGCAAACTACTCACTGCATTAGTCTCGATGCTCACCGCTATAACACTTATGAATCTCATC
CCTTTGCTGCTTAAA
CAGAAGAGAAAGAAAAAGGTGTGTATTTGTACATTAAGCAGCATTGGTGTAAACAAGAGTAGTTCTATTGGATGCAATGATGAAGAAAGTAGTAT
CATGGTTGTTGTTTTTATCGATCGTTGCTTCCTTATGGGTTGTTGATGGTTATATTGAATGTCCTTGTGATGATAGTGATGCATTTTTTAGCATG
GAAACAATGTTATTTGTTCAAAAAGCCGGTGATCTCGGTATAGCAGTGGCCTATTTTTCCATCCCAATCGAGATCATCTACTTCGTTTCCTGTTC
TAGTTTTCCGTTCAAATGGGTGCTCTTTCAATTCGGAGCATTCATTGTACTTTGTGGTTTAACACATTTTCTCACCTTCTTAACTCATTTTGGCA
AATACACATTTCACCTTATTCTTGCCCTTATTGTTTGCAAACTACTCACTGCATTAGTCTCGATGCTCACCGCTATAACACTTATGAATCTCATC
CCTTTGCTGCTTAAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E364767] | SGN-U581694 | Tomato 200607 | Build 2 | 10 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T178168 [Download][View] | Facility Assigned ID: TPTAO54TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.951 | Expected Error Rate: 0.0012 | Quality Trim Threshold: 14.5 |
Working
