This site uses cookies to provide logins and other features. Please accept the use of cookies by clicking Accept.
Potato locus MYB-CC type transfactor
Locus details | Download GMOD XML | Note to Editors | Annotation guidelines |
[loading edit links...]
|
[loading...]
|
|
![]() ![]() |
Registry name: | None | [Associate registry name] |
![]() ![]() | [Add notes, figures or images] |
Success
The display image was set successfully.
Image | Description | Type |
---|
![]() ![]() | [Associate accession] |
Accession name:
Would you Like to specify an allele?
Alleles (0) | None | [Add new Allele] |
![]() ![]() | [Associate new locus] |
[loading...]
|
Associated loci - graphical view | None |
![]() ![]() |
[loading...]
![]() ![]() |
![]() ![]() |
![]() ![]() | unprocessed genomic sequence region underlying this gene |
>PGSC0003DMG400011435 PGSC_DMv3_219_ch10:43816675..43820101
GTTCATTCCTTATCTACGTTACAGAATATTTAAAATATAGTCGGCATTTGGCACTTACATGTTGACATATTCATATTCTTTATATTATGTGTATGGAGTCATTTAGCATATAACAAAAAGAAGAAGAAGAAATTAGGAGCAAAGATTCAATTTTTATTTTTCAAGAATCTTCATCCTTTTAGTTTCTTGATTTTTCGCGCTTTTTAATTAAGACATTCATTCAAGAAATGCAGTTTGTTTGTTGAAAATATTAAAACAGAATCACCCTTGTTTGTGTATTTTGATAGAAGTTGCTATTTTCTTGATCTTGATCTTGACTAGTCGTTTTGGCGAAAAAATGAGTATTCAGAACTATGAATTAGCAAGTGATTGCAACTTAGAGTTCCCACAGATGGGATTTTGTTTCCAGCCTGAAAACTCTGCAGAAAATGGTTGTCAACAGCAGCAGCAACAGAATTTTTGGCCTAGTACTGATTCATCATCATCGAGAACGATTATAAGTCGAATAGGATCATCACCTTCTGCTTTTTTTGCTACAGAGAGGTACCTTGGATTAACACAATATGAAAACCAAGACAACAATAATAGTTGTTCTCAACTATCCAAGAATCTTGGTCCTCAAACTACGTCGTTTACTCAGCAATGTGGAAATGGATTCTTGGCAGATTCATCAGCACGAGTTGACACCGATTTTCCTAAGATTTCAATGCCATCATTCATCAGATCACAGTTTTCAAGTAGTCAACCATTTGGTCCTGAAGGACTCTATGGAAATCCCTTTAGTAATCTATCAGAGAAAGAGAGGATTTTGCTTCTTAAGAGCAAGTTGTTTAGAGAAATTGACTCTTCAAATAGGCAGCCTGCTTCAATCCCTTTTCAAGGAAATCAAGACTATGGTGTAAGTACTTGATTCTTGTTTACATAATACAGTCAAATCTCTCTGTAACGATTTTGTTTCTCCTGATATGTTTTGGTTGCTATAGCTAGATGTTGTTATCGAGAACATCTAATATAACGTAATATGAAAGTTTGTTCCAAAGAAAACTTGGCTGGTATAGAGAGGTCTGACTGAAGTATAGTTTTTCAAGTATTTGAATTTAAGTACTTTCAATTGCTTGTTGTCTACATAATACAGTCAAACCTCTCTATAACAGTGTTGTTTGTCCTGATATGTTTTAGTTGCTATAGCGAGATGTTATTGAAAACCATCTAATATTACGTAATATGAAAGTCTGTTCCAAAGAAAACTTGGCCGTTATAGAGAGGCCTGACTGTAGTATTGTTTTTCAAGTTTTTATTCTGACTCGAGTTATGTTCCAACAGGTCTCAAATAATACATGTGGTTTTAACTTGGTACATATAAGGCAACAATCTGGAAGTCAATCAGCAAATAGTTTTAACAACTCTGGATGTTCTGGAGGATCTTTATCGAGTAAGGCACGAATCAGGTGGACTCAGGATCTTCATGATCGATTTGTTGAGTGTGTAAATCGTCTTGGAGGAGCTGACAGTAAGTAAATTTACACATTTTTTTAGCTTTTGTTTCTTTGGAGGTGATCATTTTGGCTATGGATTAATTGTTCTTCACTTCATTTGCCAGAGGCGACGCCAAAGGCAATACTAAAGCTGATGGATTCAGAAGGATTAACAATTTTTCATGTAAAAAGTCATTTACAGGTACTTGTTAATATGAAAGAAATACTTTCTTGGAACACTTTTTGTATTTAGACAAAATTCTGAATCAAATGTTTTTTCCTTCTTGTTTTGACTAGAAATATCGAAATGCAAAGTTCATCCCTGAATCGACAGAAGGTATGTATTATCCGAAATAAGCTTCATGTTTATTATGTAAGAGATATTCATCCCACAGCTTGAACCCGTGACTTGTAGTTCATACAGAGACAATTTTATCGTTTCTCCAAGGCTCTCTTCATTACTCAAGCATCAGTACAGATGTATGCTGCTTGTTTTATGCTTTTTTGTGTTAATTTCTGAGCAAAAAAAAATCAAATATGTTTCTCCAAATACAAGATCCTTAACCACATATAAGTATCCTCGTCTTGATAAACAGTTAATACACCTTATTTCCAAACAAGTTGGAGTCCGTTATATGAATCCTCACGAACCATGTTCTAAACCTTCTTCGAAAAATCTTCTCTGCTTTCATTTTTTATCATTTACGCAACAGGTAGATCCAACATGATGAAAAACACAAGAAGAGACTATTTCCTTAAACAAATATGCTATTAGTAAATCTGTTGAAGTCTTTGAAATCTCAGAAGATTGAAAGAACATTTTCATCTTACTTCTTATACAAATCACTTTAATTTTATTTCGTATGATGATGATATGAAATGAGCTTTAAATGAAGGAGTGGGGGATTCGTATAGCGGACCCCAACTTGTTTGAGACTGAGGCGTAGTTGTTGTTTAAATTTGATATTTACAGCAAACTAAAAACTTAATTTTAACTCTGCTTGTGGAAAAATGCTCTCTGAGATATACTCAAATCTGTCATTACATGCTAAGTACTTAATCTTAAAGTTTCCATCTCTTTCTGGAAATGAGAGTTCCCTCCTTCCTATGATGCAGGGAGATCTGGAAAAACAGACAGCCCGAATAATGTGTCACAGATCGACAGCAAAACGTATGTTCTTTGCAACTATCTTGACAAATTTTCGTGACTATTTTAGCTGGAAAGTTACCTTAATACAGATTTCTTTTCAGTGGAATGCAAATCAAAGAAGCATTGCATATGCAGCTAGAAGTCCAGAGGCGTCTTCACGAGCAACTAGAGGTACATTTAGTACATGAAAAGATATAAATTTAAACACTTGTAGGCATGCTTAGAGCTGAAACAGTATCAAGGCAATCTTTCTAAATCTTATTGTCTTTCTGTTGTTAGATTCAGCGGAAGTTACAATTGAGGATCGAAGAACAAGGGGAGCAGTTGAAGAAGATATTTGAACAACAACAACAAACAACTAGGAGTCTCTTGGAGACACGAAATTCAAGCATTTCGTCTCCTGCTGATCAGTTCACCCCGCACGAAGATGAAGTTTTTGCTGCAGAAAGCTTCAATAATACTCATTTCCAATCTAATATAAGTTACAATGACATGTAAACAACATTAGTTTTACATTTTTTCAGCTAGTTTTTGAAAGAGAGTCGACGTTAGCATTTCTGTAAAGATAATTTTGCCTCCCAAGCAAACTACACAAAAAAAAAATGTATATTACAAAGTGAAGACATAAATATCATGCAAAAACTTAAAGTACTTCATTCATGCTATATGTTCAATGGTGCTCTGGTGTGCATAAGGAGAAATTTGACTAATGATAGTTATTTAATAAGGTGATCTTGTAAGTTGTAATATGCTTGTATACACTAAATTTTGTCTTTGCTTCTCTGTAGTTTGCCCTCAAGTG
GTTCATTCCTTATCTACGTTACAGAATATTTAAAATATAGTCGGCATTTGGCACTTACATGTTGACATATTCATATTCTTTATATTATGTGTATGGAGTCATTTAGCATATAACAAAAAGAAGAAGAAGAAATTAGGAGCAAAGATTCAATTTTTATTTTTCAAGAATCTTCATCCTTTTAGTTTCTTGATTTTTCGCGCTTTTTAATTAAGACATTCATTCAAGAAATGCAGTTTGTTTGTTGAAAATATTAAAACAGAATCACCCTTGTTTGTGTATTTTGATAGAAGTTGCTATTTTCTTGATCTTGATCTTGACTAGTCGTTTTGGCGAAAAAATGAGTATTCAGAACTATGAATTAGCAAGTGATTGCAACTTAGAGTTCCCACAGATGGGATTTTGTTTCCAGCCTGAAAACTCTGCAGAAAATGGTTGTCAACAGCAGCAGCAACAGAATTTTTGGCCTAGTACTGATTCATCATCATCGAGAACGATTATAAGTCGAATAGGATCATCACCTTCTGCTTTTTTTGCTACAGAGAGGTACCTTGGATTAACACAATATGAAAACCAAGACAACAATAATAGTTGTTCTCAACTATCCAAGAATCTTGGTCCTCAAACTACGTCGTTTACTCAGCAATGTGGAAATGGATTCTTGGCAGATTCATCAGCACGAGTTGACACCGATTTTCCTAAGATTTCAATGCCATCATTCATCAGATCACAGTTTTCAAGTAGTCAACCATTTGGTCCTGAAGGACTCTATGGAAATCCCTTTAGTAATCTATCAGAGAAAGAGAGGATTTTGCTTCTTAAGAGCAAGTTGTTTAGAGAAATTGACTCTTCAAATAGGCAGCCTGCTTCAATCCCTTTTCAAGGAAATCAAGACTATGGTGTAAGTACTTGATTCTTGTTTACATAATACAGTCAAATCTCTCTGTAACGATTTTGTTTCTCCTGATATGTTTTGGTTGCTATAGCTAGATGTTGTTATCGAGAACATCTAATATAACGTAATATGAAAGTTTGTTCCAAAGAAAACTTGGCTGGTATAGAGAGGTCTGACTGAAGTATAGTTTTTCAAGTATTTGAATTTAAGTACTTTCAATTGCTTGTTGTCTACATAATACAGTCAAACCTCTCTATAACAGTGTTGTTTGTCCTGATATGTTTTAGTTGCTATAGCGAGATGTTATTGAAAACCATCTAATATTACGTAATATGAAAGTCTGTTCCAAAGAAAACTTGGCCGTTATAGAGAGGCCTGACTGTAGTATTGTTTTTCAAGTTTTTATTCTGACTCGAGTTATGTTCCAACAGGTCTCAAATAATACATGTGGTTTTAACTTGGTACATATAAGGCAACAATCTGGAAGTCAATCAGCAAATAGTTTTAACAACTCTGGATGTTCTGGAGGATCTTTATCGAGTAAGGCACGAATCAGGTGGACTCAGGATCTTCATGATCGATTTGTTGAGTGTGTAAATCGTCTTGGAGGAGCTGACAGTAAGTAAATTTACACATTTTTTTAGCTTTTGTTTCTTTGGAGGTGATCATTTTGGCTATGGATTAATTGTTCTTCACTTCATTTGCCAGAGGCGACGCCAAAGGCAATACTAAAGCTGATGGATTCAGAAGGATTAACAATTTTTCATGTAAAAAGTCATTTACAGGTACTTGTTAATATGAAAGAAATACTTTCTTGGAACACTTTTTGTATTTAGACAAAATTCTGAATCAAATGTTTTTTCCTTCTTGTTTTGACTAGAAATATCGAAATGCAAAGTTCATCCCTGAATCGACAGAAGGTATGTATTATCCGAAATAAGCTTCATGTTTATTATGTAAGAGATATTCATCCCACAGCTTGAACCCGTGACTTGTAGTTCATACAGAGACAATTTTATCGTTTCTCCAAGGCTCTCTTCATTACTCAAGCATCAGTACAGATGTATGCTGCTTGTTTTATGCTTTTTTGTGTTAATTTCTGAGCAAAAAAAAATCAAATATGTTTCTCCAAATACAAGATCCTTAACCACATATAAGTATCCTCGTCTTGATAAACAGTTAATACACCTTATTTCCAAACAAGTTGGAGTCCGTTATATGAATCCTCACGAACCATGTTCTAAACCTTCTTCGAAAAATCTTCTCTGCTTTCATTTTTTATCATTTACGCAACAGGTAGATCCAACATGATGAAAAACACAAGAAGAGACTATTTCCTTAAACAAATATGCTATTAGTAAATCTGTTGAAGTCTTTGAAATCTCAGAAGATTGAAAGAACATTTTCATCTTACTTCTTATACAAATCACTTTAATTTTATTTCGTATGATGATGATATGAAATGAGCTTTAAATGAAGGAGTGGGGGATTCGTATAGCGGACCCCAACTTGTTTGAGACTGAGGCGTAGTTGTTGTTTAAATTTGATATTTACAGCAAACTAAAAACTTAATTTTAACTCTGCTTGTGGAAAAATGCTCTCTGAGATATACTCAAATCTGTCATTACATGCTAAGTACTTAATCTTAAAGTTTCCATCTCTTTCTGGAAATGAGAGTTCCCTCCTTCCTATGATGCAGGGAGATCTGGAAAAACAGACAGCCCGAATAATGTGTCACAGATCGACAGCAAAACGTATGTTCTTTGCAACTATCTTGACAAATTTTCGTGACTATTTTAGCTGGAAAGTTACCTTAATACAGATTTCTTTTCAGTGGAATGCAAATCAAAGAAGCATTGCATATGCAGCTAGAAGTCCAGAGGCGTCTTCACGAGCAACTAGAGGTACATTTAGTACATGAAAAGATATAAATTTAAACACTTGTAGGCATGCTTAGAGCTGAAACAGTATCAAGGCAATCTTTCTAAATCTTATTGTCTTTCTGTTGTTAGATTCAGCGGAAGTTACAATTGAGGATCGAAGAACAAGGGGAGCAGTTGAAGAAGATATTTGAACAACAACAACAAACAACTAGGAGTCTCTTGGAGACACGAAATTCAAGCATTTCGTCTCCTGCTGATCAGTTCACCCCGCACGAAGATGAAGTTTTTGCTGCAGAAAGCTTCAATAATACTCATTTCCAATCTAATATAAGTTACAATGACATGTAAACAACATTAGTTTTACATTTTTTCAGCTAGTTTTTGAAAGAGAGTCGACGTTAGCATTTCTGTAAAGATAATTTTGCCTCCCAAGCAAACTACACAAAAAAAAAATGTATATTACAAAGTGAAGACATAAATATCATGCAAAAACTTAAAGTACTTCATTCATGCTATATGTTCAATGGTGCTCTGGTGTGCATAAGGAGAAATTTGACTAATGATAGTTATTTAATAAGGTGATCTTGTAAGTTGTAATATGCTTGTATACACTAAATTTTGTCTTTGCTTCTCTGTAGTTTGCCCTCAAGTG
Download sequence region |
Get flanking sequences on PGSC_DMv3_219_ch10
|
![]() ![]() |
Ontology terms | None | terms associated with this mRNA |
![]() ![]() | spliced cDNA sequence, including UTRs |
>PGSC0003DMT400029756 Transcription factor
GTTCATTCCTTATCTACGTTACAGAATATTTAAAATATAGTCGGCATTTGGCACTTACATGTTGACATATTCATATTCTTTATATTATGTGTATGGAGTCATTTAGCATATAACAAAAAGAAGAAGAAGAAATTAGGAGCAAAGATTCAATTTTTATTTTTCAAGAATCTTCATCCTTTTAGTTTCTTGATTTTTCGCGCTTTTTAATTAAGACATTCATTCAAGAAATGCAGTTTGTTTGTTGAAAATATTAAAACAGAATCACCCTTGTTTGTGTATTTTGATAGAAGTTGCTATTTTCTTGATCTTGATCTTGACTAGTCGTTTTGGCGAAAAAATGAGTATTCAGAACTATGAATTAGCAAGTGATTGCAACTTAGAGTTCCCACAGATGGGATTTTGTTTCCAGCCTGAAAACTCTGCAGAAAATGGTTGTCAACAGCAGCAGCAACAGAATTTTTGGCCTAGTACTGATTCATCATCATCGAGAACGATTATAAGTCGAATAGGATCATCACCTTCTGCTTTTTTTGCTACAGAGAGGTACCTTGGATTAACACAATATGAAAACCAAGACAACAATAATAGTTGTTCTCAACTATCCAAGAATCTTGGTCCTCAAACTACGTCGTTTACTCAGCAATGTGGAAATGGATTCTTGGCAGATTCATCAGCACGAGTTGACACCGATTTTCCTAAGATTTCAATGCCATCATTCATCAGATCACAGTTTTCAAGTAGTCAACCATTTGGTCCTGAAGGACTCTATGGAAATCCCTTTAGTAATCTATCAGAGAAAGAGAGGATTTTGCTTCTTAAGAGCAAGTTGTTTAGAGAAATTGACTCTTCAAATAGGCAGCCTGCTTCAATCCCTTTTCAAGGAAATCAAGACTATGGTGTCTCAAATAATACATGTGGTTTTAACTTGGTACATATAAGGCAACAATCTGGAAGTCAATCAGCAAATAGTTTTAACAACTCTGGATGTTCTGGAGGATCTTTATCGAGTAAGGCACGAATCAGGTGGACTCAGGATCTTCATGATCGATTTGTTGAGTGTGTAAATCGTCTTGGAGGAGCTGACAAGGCGACGCCAAAGGCAATACTAAAGCTGATGGATTCAGAAGGATTAACAATTTTTCATGTAAAAAGTCATTTACAGAAATATCGAAATGCAAAGTTCATCCCTGAATCGACAGAAGGGAGATCTGGAAAAACAGACAGCCCGAATAATGTGTCACAGATCGACAGCAAAACGTATGTTCTTTGCAACTATCTTGACAAATTTTCGTGACTATTTTAGCTGGAAAGTTACCTTAATACAGATTTCTTTTCAGTGGAATGCAAATCAAAGAAGCATTGCATATGCAGCTAGAAGTCCAGAGGCGTCTTCACGAGCAACTAGAGATTCAGCGGAAGTTACAATTGAGGATCGAAGAACAAGGGGAGCAGTTGAAGAAGATATTTGAACAACAACAACAAACAACTAGGAGTCTCTTGGAGACACGAAATTCAAGCATTTCGTCTCCTGCTGATCAGTTCACCCCGCACGAAGATGAAGTTTTTGCTGCAGAAAGCTTCAATAATACTCATTTCCAATCTAATATAAGTTACAATGACATGTAAACAACATTAGTTTTACATTTTTTCAGCTAGTTTTTGAAAGAGAGTCGACGTTAGCATTTCTGTAAAGATAATTTTGCCTCCCAAGCAAACTACACAAAAAAAAAATGTATATTACAAAGTGAAGACATAAATATCATGCAAAAACTTAAAGTACTTCATTCATGCTATATGTTCAATGGTGCTCTGGTGTGCATAAGGAGAAATTTGACTAATGATAGTTATTTAATAAGGTGATCTTGTAAGTTGTAATATGCTTGTATACACTAAATTTTGTCTTTGCTTCTCTGTAGTTTGCCCTCAAGTG
GTTCATTCCTTATCTACGTTACAGAATATTTAAAATATAGTCGGCATTTGGCACTTACATGTTGACATATTCATATTCTTTATATTATGTGTATGGAGTCATTTAGCATATAACAAAAAGAAGAAGAAGAAATTAGGAGCAAAGATTCAATTTTTATTTTTCAAGAATCTTCATCCTTTTAGTTTCTTGATTTTTCGCGCTTTTTAATTAAGACATTCATTCAAGAAATGCAGTTTGTTTGTTGAAAATATTAAAACAGAATCACCCTTGTTTGTGTATTTTGATAGAAGTTGCTATTTTCTTGATCTTGATCTTGACTAGTCGTTTTGGCGAAAAAATGAGTATTCAGAACTATGAATTAGCAAGTGATTGCAACTTAGAGTTCCCACAGATGGGATTTTGTTTCCAGCCTGAAAACTCTGCAGAAAATGGTTGTCAACAGCAGCAGCAACAGAATTTTTGGCCTAGTACTGATTCATCATCATCGAGAACGATTATAAGTCGAATAGGATCATCACCTTCTGCTTTTTTTGCTACAGAGAGGTACCTTGGATTAACACAATATGAAAACCAAGACAACAATAATAGTTGTTCTCAACTATCCAAGAATCTTGGTCCTCAAACTACGTCGTTTACTCAGCAATGTGGAAATGGATTCTTGGCAGATTCATCAGCACGAGTTGACACCGATTTTCCTAAGATTTCAATGCCATCATTCATCAGATCACAGTTTTCAAGTAGTCAACCATTTGGTCCTGAAGGACTCTATGGAAATCCCTTTAGTAATCTATCAGAGAAAGAGAGGATTTTGCTTCTTAAGAGCAAGTTGTTTAGAGAAATTGACTCTTCAAATAGGCAGCCTGCTTCAATCCCTTTTCAAGGAAATCAAGACTATGGTGTCTCAAATAATACATGTGGTTTTAACTTGGTACATATAAGGCAACAATCTGGAAGTCAATCAGCAAATAGTTTTAACAACTCTGGATGTTCTGGAGGATCTTTATCGAGTAAGGCACGAATCAGGTGGACTCAGGATCTTCATGATCGATTTGTTGAGTGTGTAAATCGTCTTGGAGGAGCTGACAAGGCGACGCCAAAGGCAATACTAAAGCTGATGGATTCAGAAGGATTAACAATTTTTCATGTAAAAAGTCATTTACAGAAATATCGAAATGCAAAGTTCATCCCTGAATCGACAGAAGGGAGATCTGGAAAAACAGACAGCCCGAATAATGTGTCACAGATCGACAGCAAAACGTATGTTCTTTGCAACTATCTTGACAAATTTTCGTGACTATTTTAGCTGGAAAGTTACCTTAATACAGATTTCTTTTCAGTGGAATGCAAATCAAAGAAGCATTGCATATGCAGCTAGAAGTCCAGAGGCGTCTTCACGAGCAACTAGAGATTCAGCGGAAGTTACAATTGAGGATCGAAGAACAAGGGGAGCAGTTGAAGAAGATATTTGAACAACAACAACAAACAACTAGGAGTCTCTTGGAGACACGAAATTCAAGCATTTCGTCTCCTGCTGATCAGTTCACCCCGCACGAAGATGAAGTTTTTGCTGCAGAAAGCTTCAATAATACTCATTTCCAATCTAATATAAGTTACAATGACATGTAAACAACATTAGTTTTACATTTTTTCAGCTAGTTTTTGAAAGAGAGTCGACGTTAGCATTTCTGTAAAGATAATTTTGCCTCCCAAGCAAACTACACAAAAAAAAAATGTATATTACAAAGTGAAGACATAAATATCATGCAAAAACTTAAAGTACTTCATTCATGCTATATGTTCAATGGTGCTCTGGTGTGCATAAGGAGAAATTTGACTAATGATAGTTATTTAATAAGGTGATCTTGTAAGTTGTAATATGCTTGTATACACTAAATTTTGTCTTTGCTTCTCTGTAGTTTGCCCTCAAGTG
![]() ![]() | translated polypeptide sequence |
>PGSC0003DMT400029756 Transcription factor
MSIQNYELASDCNLEFPQMGFCFQPENSAENGCQQQQQQNFWPSTDSSSSRTIISRIGSSPSAFFATERYLGLTQYENQDNNNSCSQLSKNLGPQTTSFTQQCGNGFLADSSARVDTDFPKISMPSFIRSQFSSSQPFGPEGLYGNPFSNLSEKERILLLKSKLFREIDSSNRQPASIPFQGNQDYGVSNNTCGFNLVHIRQQSGSQSANSFNNSGCSGGSLSSKARIRWTQDLHDRFVECVNRLGGADKATPKAILKLMDSEGLTIFHVKSHLQKYRNAKFIPESTEGRSGKTDSPNNVSQIDSKTYVLCNYLDKFS*
MSIQNYELASDCNLEFPQMGFCFQPENSAENGCQQQQQQNFWPSTDSSSSRTIISRIGSSPSAFFATERYLGLTQYENQDNNNSCSQLSKNLGPQTTSFTQQCGNGFLADSSARVDTDFPKISMPSFIRSQFSSSQPFGPEGLYGNPFSNLSEKERILLLKSKLFREIDSSNRQPASIPFQGNQDYGVSNNTCGFNLVHIRQQSGSQSANSFNNSGCSGGSLSSKARIRWTQDLHDRFVECVNRLGGADKATPKAILKLMDSEGLTIFHVKSHLQKYRNAKFIPESTEGRSGKTDSPNNVSQIDSKTYVLCNYLDKFS*
![]() ![]() |
Ontology terms | None | terms associated with this mRNA |
![]() ![]() | spliced cDNA sequence, including UTRs |
>PGSC0003DMT400029758 Transcription factor
GTTCATTCCTTATCTACGTTACAGAATATTTAAAATATAGTCGGCATTTGGCACTTACATGTTGACATATTCATATTCTTTATATTATGTGTATGGAGTCATTTAGCATATAACAAAAAGAAGAAGAAGAAATTAGGAGCAAAGATTCAATTTTTATTTTTCAAGAATCTTCATCCTTTTAGTTTCTTGATTTTTCGCGCTTTTTAATTAAGACATTCATTCAAGAAATGCAGTTTGTTTGTTGAAAATATTAAAACAGAATCACCCTTGTTTGTGTATTTTGATAGAAGTTGCTATTTTCTTGATCTTGATCTTGACTAGTCGTTTTGGCGAAAAAATGAGTATTCAGAACTATGAATTAGCAAGTGATTGCAACTTAGAGTTCCCACAGATGGGATTTTGTTTCCAGCCTGAAAACTCTGCAGAAAATGGTTGTCAACAGCAGCAGCAACAGAATTTTTGGCCTAGTACTGATTCATCATCATCGAGAACGATTATAAGTCGAATAGGATCATCACCTTCTGCTTTTTTTGCTACAGAGAGGTACCTTGGATTAACACAATATGAAAACCAAGACAACAATAATAGTTGTTCTCAACTATCCAAGAATCTTGGTCCTCAAACTACGTCGTTTACTCAGCAATGTGGAAATGGATTCTTGGCAGATTCATCAGCACGAGTTGACACCGATTTTCCTAAGATTTCAATGCCATCATTCATCAGATCACAGTTTTCAAGTAGTCAACCATTTGGTCCTGAAGGACTCTATGGAAATCCCTTTAGTAATCTATCAGAGAAAGAGAGGATTTTGCTTCTTAAGAGCAAGTTGTTTAGAGAAATTGACTCTTCAAATAGGCAGCCTGCTTCAATCCCTTTTCAAGGAAATCAAGACTATGGTGTCTCAAATAATACATGTGGTTTTAACTTGGTACATATAAGGCAACAATCTGGAAGTCAATCAGCAAATAGTTTTAACAACTCTGGATGTTCTGGAGGATCTTTATCGAGTAAGGCACGAATCAGGTGGACTCAGGATCTTCATGATCGATTTGTTGAGTGTGTAAATCGTCTTGGAGGAGCTGACAAGGCGACGCCAAAGGCAATACTAAAGCTGATGGATTCAGAAGGATTAACAATTTTTCATGTAAAAAGTCATTTACAGAAATATCGAAATGCAAAGTTCATCCCTGAATCGACAGAAGGGAGATCTGGAAAAACAGACAGCCCGAATAATGTGTCACAGATCGACAGCAAAACTGGAATGCAAATCAAAGAAGCATTGCATATGCAGCTAGAAGTCCAGAGGCGTCTTCACGAGCAACTAGAGATTCAGCGGAAGTTACAATTGAGGATCGAAGAACAAGGGGAGCAGTTGAAGAAGATATTTGAACAACAACAACAAACAACTAGGAGTCTCTTGGAGACACGAAATTCAAGCATTTCGTCTCCTGCTGATCAGTTCACCCCGCACGAAGATGAAGTTTTTGCTGCAGAAAGCTTCAATAATACTCATTTCCAATCTAATATAAGTTACAATGACATGTAAACAACATTAGTTTTACATTTTTTCAGCTAGTTTTTGAAAGAGAGTCGACGTTAGCATTTCTGTAAAGATAATTTTGCCTCCCAAGCAAACTACACAAAAAAAAAATGTATATTACAAAGTGAAGACATAAATATCATGCAAAAACTTAAAGTACTTCATTCATGCTATATGTTCAATGGTGCTCTGGTGTGCATAAGGAGAAATTTGACTAATGATAGTTATTTAATAAGGTGATCTTGTAAGTTGTAATATGCTTGTATACACTAAATTTTGTCTTTGCTTCTCTGTAGTTTGCCCTCAAGTG
GTTCATTCCTTATCTACGTTACAGAATATTTAAAATATAGTCGGCATTTGGCACTTACATGTTGACATATTCATATTCTTTATATTATGTGTATGGAGTCATTTAGCATATAACAAAAAGAAGAAGAAGAAATTAGGAGCAAAGATTCAATTTTTATTTTTCAAGAATCTTCATCCTTTTAGTTTCTTGATTTTTCGCGCTTTTTAATTAAGACATTCATTCAAGAAATGCAGTTTGTTTGTTGAAAATATTAAAACAGAATCACCCTTGTTTGTGTATTTTGATAGAAGTTGCTATTTTCTTGATCTTGATCTTGACTAGTCGTTTTGGCGAAAAAATGAGTATTCAGAACTATGAATTAGCAAGTGATTGCAACTTAGAGTTCCCACAGATGGGATTTTGTTTCCAGCCTGAAAACTCTGCAGAAAATGGTTGTCAACAGCAGCAGCAACAGAATTTTTGGCCTAGTACTGATTCATCATCATCGAGAACGATTATAAGTCGAATAGGATCATCACCTTCTGCTTTTTTTGCTACAGAGAGGTACCTTGGATTAACACAATATGAAAACCAAGACAACAATAATAGTTGTTCTCAACTATCCAAGAATCTTGGTCCTCAAACTACGTCGTTTACTCAGCAATGTGGAAATGGATTCTTGGCAGATTCATCAGCACGAGTTGACACCGATTTTCCTAAGATTTCAATGCCATCATTCATCAGATCACAGTTTTCAAGTAGTCAACCATTTGGTCCTGAAGGACTCTATGGAAATCCCTTTAGTAATCTATCAGAGAAAGAGAGGATTTTGCTTCTTAAGAGCAAGTTGTTTAGAGAAATTGACTCTTCAAATAGGCAGCCTGCTTCAATCCCTTTTCAAGGAAATCAAGACTATGGTGTCTCAAATAATACATGTGGTTTTAACTTGGTACATATAAGGCAACAATCTGGAAGTCAATCAGCAAATAGTTTTAACAACTCTGGATGTTCTGGAGGATCTTTATCGAGTAAGGCACGAATCAGGTGGACTCAGGATCTTCATGATCGATTTGTTGAGTGTGTAAATCGTCTTGGAGGAGCTGACAAGGCGACGCCAAAGGCAATACTAAAGCTGATGGATTCAGAAGGATTAACAATTTTTCATGTAAAAAGTCATTTACAGAAATATCGAAATGCAAAGTTCATCCCTGAATCGACAGAAGGGAGATCTGGAAAAACAGACAGCCCGAATAATGTGTCACAGATCGACAGCAAAACTGGAATGCAAATCAAAGAAGCATTGCATATGCAGCTAGAAGTCCAGAGGCGTCTTCACGAGCAACTAGAGATTCAGCGGAAGTTACAATTGAGGATCGAAGAACAAGGGGAGCAGTTGAAGAAGATATTTGAACAACAACAACAAACAACTAGGAGTCTCTTGGAGACACGAAATTCAAGCATTTCGTCTCCTGCTGATCAGTTCACCCCGCACGAAGATGAAGTTTTTGCTGCAGAAAGCTTCAATAATACTCATTTCCAATCTAATATAAGTTACAATGACATGTAAACAACATTAGTTTTACATTTTTTCAGCTAGTTTTTGAAAGAGAGTCGACGTTAGCATTTCTGTAAAGATAATTTTGCCTCCCAAGCAAACTACACAAAAAAAAAATGTATATTACAAAGTGAAGACATAAATATCATGCAAAAACTTAAAGTACTTCATTCATGCTATATGTTCAATGGTGCTCTGGTGTGCATAAGGAGAAATTTGACTAATGATAGTTATTTAATAAGGTGATCTTGTAAGTTGTAATATGCTTGTATACACTAAATTTTGTCTTTGCTTCTCTGTAGTTTGCCCTCAAGTG
![]() ![]() | translated polypeptide sequence |
>PGSC0003DMT400029758 Transcription factor
MSIQNYELASDCNLEFPQMGFCFQPENSAENGCQQQQQQNFWPSTDSSSSRTIISRIGSSPSAFFATERYLGLTQYENQDNNNSCSQLSKNLGPQTTSFTQQCGNGFLADSSARVDTDFPKISMPSFIRSQFSSSQPFGPEGLYGNPFSNLSEKERILLLKSKLFREIDSSNRQPASIPFQGNQDYGVSNNTCGFNLVHIRQQSGSQSANSFNNSGCSGGSLSSKARIRWTQDLHDRFVECVNRLGGADKATPKAILKLMDSEGLTIFHVKSHLQKYRNAKFIPESTEGRSGKTDSPNNVSQIDSKTGMQIKEALHMQLEVQRRLHEQLEIQRKLQLRIEEQGEQLKKIFEQQQQTTRSLLETRNSSISSPADQFTPHEDEVFAAESFNNTHFQSNISYNDM*
MSIQNYELASDCNLEFPQMGFCFQPENSAENGCQQQQQQNFWPSTDSSSSRTIISRIGSSPSAFFATERYLGLTQYENQDNNNSCSQLSKNLGPQTTSFTQQCGNGFLADSSARVDTDFPKISMPSFIRSQFSSSQPFGPEGLYGNPFSNLSEKERILLLKSKLFREIDSSNRQPASIPFQGNQDYGVSNNTCGFNLVHIRQQSGSQSANSFNNSGCSGGSLSSKARIRWTQDLHDRFVECVNRLGGADKATPKAILKLMDSEGLTIFHVKSHLQKYRNAKFIPESTEGRSGKTDSPNNVSQIDSKTGMQIKEALHMQLEVQRRLHEQLEIQRKLQLRIEEQGEQLKKIFEQQQQTTRSLLETRNSSISSPADQFTPHEDEVFAAESFNNTHFQSNISYNDM*
![]() ![]() |
![]() ![]() | [Associate new unigene] |
Unigene ID:
[loading...]
![]() ![]() | [Associate new genbank sequence] |
AB192880 Solanum tuberosum PPS4 mRNA for MYB-CC type transfactor, complete cds.
Other genome matches | None |
![]() ![]() | [Associate publication] [Matching publications] |
Involvement of PPS3 phosphorylated by elicitor-responsive mitogen-activated protein kinases in the regulation of plant cell death.
Plant physiology (2005)
Show / hide abstract
Show / hide abstract
Mitogen-activated protein kinase (MAPK) cascades play pivotal roles in plant innate immunity. Overexpression of StMEK1(DD), a constitutively active MAPK kinase that activates salicylic acid-induced protein kinase (SIPK) and wound-induced protein kinase (WIPK), provokes hypersensitive response-like cell death in Nicotiana benthamiana. Here we purified a 51-kD MAPK, which was activated in potato (Solanum tuberosum) tubers treated with hyphal wall elicitor of a plant pathogen, and isolated the cDNA designated StMPK1. The deduced amino acid sequence of the StMPK1 showed strong similarity to stress-responsive MAPKs, such as tobacco (Nicotiana tabacum) SIPK and Arabidopsis (Arabidopsis thaliana) AtMPK6. To investigate the downstream signaling of StMPK1, we identified several proteins phosphorylated by StMPK1 (PPSs) using an in vitro expression cloning method. To dissect the biological function of PPSs in the plant defense, we employed virus-induced gene silencing (VIGS) in N. benthamiana. VIGS of NbPPS3 significantly delayed cell death induced by the transient expression of StMEK1(DD) and treatment with hyphal wall elicitor. Furthermore, the mobility shift of NbPPS3 on SDS-polyacrylamide gel was induced by transient expression of StMEK1(DD). The mobility shift of NbPPS3 induced by StMEK1(DD) was not compromised by VIGS of WIPK or SIPK alone, but drastically reduced by the silencing of both WIPK and SIPK. This work strongly supports the idea that PPS3 is a physiological substrate of StMPK1 and is involved in cell death activated by a MAPK cascade.
Katou, S. Yoshioka, H. Kawakita, K. Rowland, O. Jones, JD. Mori, H. Doke, N.
Plant physiology.
2005.
139(4).
1914-26.
![]() ![]() | [Add ontology annotations] |
[loading...]
![]() ![]() |
none found
User comments |
Please wait, checking for comments. (If comments do not show up, access them here)
Your Lists
Public Lists
List Contents
List Validation Report: Failed
Elements not found:
Optional: Add Missing Accessions to A List
Mismatched case
Click the Adjust Case button to align the case in the list with what is in the database.
Multiple mismatched case
Items listed here have mulitple case mismatches and must be fixed manually. If accessions need to be merged, contact the database directly.
List elements matching a synonym
Multiple synonym matches
Fuzzy Search Results
Synonym Search Results
Available Seedlots
Your Datasets
Public Datasets
Dataset Contents
Dataset Validation Failed
Elements not found:
Your Calendar
Having trouble viewing events on the calendar?
Are you associated with the breeding program you are interested in viewing?
Add New Event
Event Info
Attribute | Value |
---|---|
Project Name: | |
Start Date: | |
End Date: | |
Event Type: | |
Event Description: | |
Event Web URL: |
Edit Event
Login
Forgot Username
If you've forgotten your username, enter your email address below. An email will be sent with any account username(s) associated with your email address.
Reset Password
To reset your password, please enter your email address. A link will be sent to that address with a link that will enable you to reset your password.
Create New User
Working
