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Potato locus cinnamoyl CoA reductase 2
Locus details | Download GMOD XML | Note to Editors | Annotation guidelines |
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Registry name: | None | [Associate registry name] |
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Image | Description | Type |
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![]() ![]() | [Associate accession] |
Accession name:
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Alleles (0) | None | [Add new Allele] |
![]() ![]() | [Associate new locus] |
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Associated loci - graphical view | None |
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![]() ![]() | unprocessed genomic sequence region underlying this gene |
>PGSC0003DMG400010000 PGSC_DMv3_219_ch04:64075431..64079629
CGCCAAGCACCTTCACTAGAAACACCAGCTACTAAAGATACATTCTCATAAGCTCTAGGAATAGAAATACAAGGTTGTACTTGAATAAGTTGAGAGCAATCTGTACCCCCAACTGAGAGCAAAATAAAACAACTAAATAGAACTCAAAAGGGGTATAGTGTAACCTCCTTATTCCAGACTATGTATTATAGGTAATAGTTTGCAAGTGTATGAACTTGAAAGACATGCAGAGCAATTATTTAGTACAAAGTATTACAACAAGCAAACTTCAATCCAGAAAGCCCTTTTGTTTGTAACTTTCAACTGCATCAACTAGAGTTTCCTCCAGTGGCCTATATTGCCAACCCAACTTCTGCAACTTCTCTGAACTAAAACTTGTATCCTCCATCATATCGGTAAAACTGTAAAATAAAAAATACATTTAGGACAACAGGTTTAGATATACGAGCAACTTCTATGCACAAGTGTAAGAGCGCAGTCCACTAGTGATATTGTCCGATTTGAGCCTAGGCCTACACAGATTAAAATGTTTCACTAGGGTCTAAGGGTTTTTCCAGCATTTCTCTGGGTAACGCATTTTAAAGTTGTGTGGTCCTAGACCCAAAGTGGACAATATCACTAGTGGGCAAGGTAACACAAGGATATTTATGAATATACTTAATCAAATAGACCAAGTTCACTACACAGCTTTTTGTAATTTCTTAACCAGACACACTGGAAATAAGAAATGAAATACCCATAAGAGAAGTCCCAATTTCCTTAAGCTGCTTTTTTTTTTCCTGCAACTCTTAAACTAGACACAGGAAATAGGACACTAGATTCCCAATAAAGAAGCATAAAGTGGAAAGGAGAGAAATTCACCATTTAGGATAGTAGTAGTTGGGATAGTGTTTCTTCAGCATAGCAACTAAATCTTCTGATTTCACAGTATGAGCTGCACACAAGTATCTACCTTCAGCTTCAGGTCTCTCATACACTAGCAGTAAGGCTTCAGCTACATCACGTACGTCTACCAAAAACCGTTTCTTGTTTTCCAGCTCTTCGTATCCTTCTGTATCAACAACACAAAGAGAAGAAATGGCATCAGTCACTTCAAGCAAAAAAAGTATACATAAAAAGCACAGAAACAACACATGAAACCTTTAGCATAAAAAAATGCAAAGCAACTCAGATGATACAAAAATAAGTAGATATAATTACTTAAGTGCTTGTGCTCCTTTTAGGTAATAAATCTCGAGGTGAATGGAGAAAGAGCAAATACCTTGTTCTCACTGAAATAGAAAAAGTTTGTTTATTTCAGCAAATGTTCTATATTCCTAGACTCTGAACCAGTTATTTATAATATCCATGACTAATAGGTCAACTCGTTCTACACAGAAATTAACATTTACTACCATTAAACATGAAGCTTAGTACGTAGCTCTTGGTGCACAGTAGCTAGGAGGTCATTTATCTAACAAGGCAATACACTCGAGAATCCATAGCAAAAGCGATGCTTGAAACACTAGAGTAGAAGGATGACCAAAAAAACACCTGAGAAATGCTTCTAACCAGCACTATAACAAACTGGCCTACTAAGCTTTACCAAATGACCTATACAGCACATAACTTAAATTACAATGTCTCTCTGTCATATCAAATAATTGTGCAAGTAATTTAAAATAGAGGGGCTTTAGGCAGTTGTCCAAAGCATCTAAGGGTATAAAGTGAATGTATACATAAGGAAGAACTCACTAACTAGTGCACTGAATTTGAAATAATAAATTTAACCAAATGTTATGGACAAAAAGTCTTTAGCTGCCACTAACCAACATATTAAGCATGAAAAACTACAATAGACCTAAACTCAGTGTCTCATATGAGCCAAAAAGCTGCACACCGATTCAGGATTTCAGGTTAGTCCACCTACATGGACAAACAATATTCTAGAAATTTCCTCTTGCAGCTTAGCTAATATGCCTCAAAGATAACTAGACATCACTGTTTATGCTTTCAATGATCTCTTGCTTATAGTCAACCACCAAGTAACTTGGATAACTAAAAGTCATATATGACAAAACTTTGTTATAGTTACACATATATATCAACCTAGCACTTTAAAGCATAGGTAAAGAATTTAACAAAACACAAAACTGCATGCTAAATGTATGAACAACAGTCCGTGCTCTCAAGGAAAAACAATTAAGAAGCTTGTGGGAAAAGTGAATTCTGATTACTCCCCAATGAGCAACTCACGCAAGCAGAAATGTAGAAGTAGAAGAAATGATGCAGAAACATTAAAACAGTGAAGTATAACTATGGTTTCTTGGTACCTTTCAGCAGCTTAATGAGAGCCAAGCTACTTGCATTTGTTGTCTTCTGTAACATTGGCCCTACAACAAGTGCTGGGAGCACAGTTACCATATCAAGTCCACTTTTCTTTGCATATGACCAAGCTTCTTTCTCAGCCATTGTTTTAGAAAAACAGTACCAGTTCTGCATGCATTTGGAACCACAAAATGCAATCAGATAGGAAGCTGCTCTAGCAAACTAAGCATTCAAGAGTCAAATGCAAATTCTTCTTACAATAACTAAGCCAATCAAACAGGACACAGCTCAAGTAAATTAAGTATTCAAGATACAGATCATATATTATTTTACCAACACTTAAGTATCATATGTAAGAAACATGACTAATAATCTTAAATGTACACAGAAGTCAAATTCGCAAACTCGCATCGTTAAAAGAAGCTACATTAGTTGCTTTGCAGTATTCACTGTCCGACCAACAAGTCTCGTCCTTCACTTGGCCCTTCGGCCAGTTGGGGTCCAAGGAAGCAGCAGCAACAGAAGACACAAACACAACCCTCCTGATGTTTTCTTCAGAGCATGCCTTCAGAACATTAAGTGTGCCGTTCACTGCAGGCTCAACAAGTTCTACCTGCAATCAAGACATTGAACATATGAAGAATTTTACTTTCTTTTTTTCTTTGGTGCAGAACTAGAGCAATAGTTGTTTTGAAAGCAACCTAGAAATGTTGATCACTATACAATTGTCTCCTGGATGCACCAGATTTCCCAATGTCTTAGGTTCTCCAATAGGGAAGCTCCATAGAAGTGTCTCTTATTGCAAGTATTAATCACCGTGAAAAGATCTTTTTGAACATTACATCATATAAAATCCCAATATAAACTCACTATCCTGTCCTTCATTTTGTAGAAAGACACCTCTAAGTGCTTTCAACAACTAATAACATGTGCTAAGATCACTATTCTAGACTGCTCATAAAGATTCCACTAATGTCTGGAGATTTACAAACTGAAACCACAGGATGTGATTAATATCAACGAAGTGAAGAAGCTGATAATATCTAAACTACAGGACATGTATGGTGTCAGGGCCAACTTGTGTGCACTTCGACTCTTCCACCGGGTACCTTCTACCTCCCACTAGCAGTCTAGAACCCATACCAGGTAATTCTGCACCAAGGTTTAACTATATGGAGAAAATCACCAAAGTATTTTTGTAACTACTGAGATTTGAATCCTGGTGCAAGGTTTGCATCCACTTCATTGACCACTAGACAAACCGTCACAACCTTGAATTCATTGGCTTGTGCCGGTTTATTAGTTTACTTTGTTTTAGATATTTAGAGATCCTAGCTTTGTCAATAATTTAATAGGTGGTAGCAGATTCATACCTCGGGATTTGGTACAGAGCCCGAAGGAACTGGACAAGCAACATGAAATACTCCATTGCATCCTTTGATGGCTCCAGCAAGCGAGTTGGGATCTAGCAAGTCTGCCTTGAAGAGCTTAAGGTTGTCAGCAGCTTTATCAAGGTTCTTCAAATGAGCATACTTGTCATCAGCTGCAAATTAAATGGAATTGAGATTGATTTCTTAGGGATCTTCAATTCCATTGAAATAAAGGTCTAAAATTAGTACTCCTAGTTTGAAAACAAAGAAGAAGAAGAACAAAAACAGAGTGTTTTTAGATATTAAAAAGGGAAAACTTACAAGGATCTCTGACGGTGCCATGAACAATGTAGTCTTTAGAAAGGAGAAGCTTCACTAGCGATGAAGCCACGTATCCACCTGCGCCAGTTACACACACTCTGGATTTCTCCGCCATCAACGCCATGCCTCTGCGATTGTAATTTCTTCTTTTGTTTTCTCGTCTTTACTCCAAATAGCTCATCCGGAATATTCACACTAAAC
CGCCAAGCACCTTCACTAGAAACACCAGCTACTAAAGATACATTCTCATAAGCTCTAGGAATAGAAATACAAGGTTGTACTTGAATAAGTTGAGAGCAATCTGTACCCCCAACTGAGAGCAAAATAAAACAACTAAATAGAACTCAAAAGGGGTATAGTGTAACCTCCTTATTCCAGACTATGTATTATAGGTAATAGTTTGCAAGTGTATGAACTTGAAAGACATGCAGAGCAATTATTTAGTACAAAGTATTACAACAAGCAAACTTCAATCCAGAAAGCCCTTTTGTTTGTAACTTTCAACTGCATCAACTAGAGTTTCCTCCAGTGGCCTATATTGCCAACCCAACTTCTGCAACTTCTCTGAACTAAAACTTGTATCCTCCATCATATCGGTAAAACTGTAAAATAAAAAATACATTTAGGACAACAGGTTTAGATATACGAGCAACTTCTATGCACAAGTGTAAGAGCGCAGTCCACTAGTGATATTGTCCGATTTGAGCCTAGGCCTACACAGATTAAAATGTTTCACTAGGGTCTAAGGGTTTTTCCAGCATTTCTCTGGGTAACGCATTTTAAAGTTGTGTGGTCCTAGACCCAAAGTGGACAATATCACTAGTGGGCAAGGTAACACAAGGATATTTATGAATATACTTAATCAAATAGACCAAGTTCACTACACAGCTTTTTGTAATTTCTTAACCAGACACACTGGAAATAAGAAATGAAATACCCATAAGAGAAGTCCCAATTTCCTTAAGCTGCTTTTTTTTTTCCTGCAACTCTTAAACTAGACACAGGAAATAGGACACTAGATTCCCAATAAAGAAGCATAAAGTGGAAAGGAGAGAAATTCACCATTTAGGATAGTAGTAGTTGGGATAGTGTTTCTTCAGCATAGCAACTAAATCTTCTGATTTCACAGTATGAGCTGCACACAAGTATCTACCTTCAGCTTCAGGTCTCTCATACACTAGCAGTAAGGCTTCAGCTACATCACGTACGTCTACCAAAAACCGTTTCTTGTTTTCCAGCTCTTCGTATCCTTCTGTATCAACAACACAAAGAGAAGAAATGGCATCAGTCACTTCAAGCAAAAAAAGTATACATAAAAAGCACAGAAACAACACATGAAACCTTTAGCATAAAAAAATGCAAAGCAACTCAGATGATACAAAAATAAGTAGATATAATTACTTAAGTGCTTGTGCTCCTTTTAGGTAATAAATCTCGAGGTGAATGGAGAAAGAGCAAATACCTTGTTCTCACTGAAATAGAAAAAGTTTGTTTATTTCAGCAAATGTTCTATATTCCTAGACTCTGAACCAGTTATTTATAATATCCATGACTAATAGGTCAACTCGTTCTACACAGAAATTAACATTTACTACCATTAAACATGAAGCTTAGTACGTAGCTCTTGGTGCACAGTAGCTAGGAGGTCATTTATCTAACAAGGCAATACACTCGAGAATCCATAGCAAAAGCGATGCTTGAAACACTAGAGTAGAAGGATGACCAAAAAAACACCTGAGAAATGCTTCTAACCAGCACTATAACAAACTGGCCTACTAAGCTTTACCAAATGACCTATACAGCACATAACTTAAATTACAATGTCTCTCTGTCATATCAAATAATTGTGCAAGTAATTTAAAATAGAGGGGCTTTAGGCAGTTGTCCAAAGCATCTAAGGGTATAAAGTGAATGTATACATAAGGAAGAACTCACTAACTAGTGCACTGAATTTGAAATAATAAATTTAACCAAATGTTATGGACAAAAAGTCTTTAGCTGCCACTAACCAACATATTAAGCATGAAAAACTACAATAGACCTAAACTCAGTGTCTCATATGAGCCAAAAAGCTGCACACCGATTCAGGATTTCAGGTTAGTCCACCTACATGGACAAACAATATTCTAGAAATTTCCTCTTGCAGCTTAGCTAATATGCCTCAAAGATAACTAGACATCACTGTTTATGCTTTCAATGATCTCTTGCTTATAGTCAACCACCAAGTAACTTGGATAACTAAAAGTCATATATGACAAAACTTTGTTATAGTTACACATATATATCAACCTAGCACTTTAAAGCATAGGTAAAGAATTTAACAAAACACAAAACTGCATGCTAAATGTATGAACAACAGTCCGTGCTCTCAAGGAAAAACAATTAAGAAGCTTGTGGGAAAAGTGAATTCTGATTACTCCCCAATGAGCAACTCACGCAAGCAGAAATGTAGAAGTAGAAGAAATGATGCAGAAACATTAAAACAGTGAAGTATAACTATGGTTTCTTGGTACCTTTCAGCAGCTTAATGAGAGCCAAGCTACTTGCATTTGTTGTCTTCTGTAACATTGGCCCTACAACAAGTGCTGGGAGCACAGTTACCATATCAAGTCCACTTTTCTTTGCATATGACCAAGCTTCTTTCTCAGCCATTGTTTTAGAAAAACAGTACCAGTTCTGCATGCATTTGGAACCACAAAATGCAATCAGATAGGAAGCTGCTCTAGCAAACTAAGCATTCAAGAGTCAAATGCAAATTCTTCTTACAATAACTAAGCCAATCAAACAGGACACAGCTCAAGTAAATTAAGTATTCAAGATACAGATCATATATTATTTTACCAACACTTAAGTATCATATGTAAGAAACATGACTAATAATCTTAAATGTACACAGAAGTCAAATTCGCAAACTCGCATCGTTAAAAGAAGCTACATTAGTTGCTTTGCAGTATTCACTGTCCGACCAACAAGTCTCGTCCTTCACTTGGCCCTTCGGCCAGTTGGGGTCCAAGGAAGCAGCAGCAACAGAAGACACAAACACAACCCTCCTGATGTTTTCTTCAGAGCATGCCTTCAGAACATTAAGTGTGCCGTTCACTGCAGGCTCAACAAGTTCTACCTGCAATCAAGACATTGAACATATGAAGAATTTTACTTTCTTTTTTTCTTTGGTGCAGAACTAGAGCAATAGTTGTTTTGAAAGCAACCTAGAAATGTTGATCACTATACAATTGTCTCCTGGATGCACCAGATTTCCCAATGTCTTAGGTTCTCCAATAGGGAAGCTCCATAGAAGTGTCTCTTATTGCAAGTATTAATCACCGTGAAAAGATCTTTTTGAACATTACATCATATAAAATCCCAATATAAACTCACTATCCTGTCCTTCATTTTGTAGAAAGACACCTCTAAGTGCTTTCAACAACTAATAACATGTGCTAAGATCACTATTCTAGACTGCTCATAAAGATTCCACTAATGTCTGGAGATTTACAAACTGAAACCACAGGATGTGATTAATATCAACGAAGTGAAGAAGCTGATAATATCTAAACTACAGGACATGTATGGTGTCAGGGCCAACTTGTGTGCACTTCGACTCTTCCACCGGGTACCTTCTACCTCCCACTAGCAGTCTAGAACCCATACCAGGTAATTCTGCACCAAGGTTTAACTATATGGAGAAAATCACCAAAGTATTTTTGTAACTACTGAGATTTGAATCCTGGTGCAAGGTTTGCATCCACTTCATTGACCACTAGACAAACCGTCACAACCTTGAATTCATTGGCTTGTGCCGGTTTATTAGTTTACTTTGTTTTAGATATTTAGAGATCCTAGCTTTGTCAATAATTTAATAGGTGGTAGCAGATTCATACCTCGGGATTTGGTACAGAGCCCGAAGGAACTGGACAAGCAACATGAAATACTCCATTGCATCCTTTGATGGCTCCAGCAAGCGAGTTGGGATCTAGCAAGTCTGCCTTGAAGAGCTTAAGGTTGTCAGCAGCTTTATCAAGGTTCTTCAAATGAGCATACTTGTCATCAGCTGCAAATTAAATGGAATTGAGATTGATTTCTTAGGGATCTTCAATTCCATTGAAATAAAGGTCTAAAATTAGTACTCCTAGTTTGAAAACAAAGAAGAAGAAGAACAAAAACAGAGTGTTTTTAGATATTAAAAAGGGAAAACTTACAAGGATCTCTGACGGTGCCATGAACAATGTAGTCTTTAGAAAGGAGAAGCTTCACTAGCGATGAAGCCACGTATCCACCTGCGCCAGTTACACACACTCTGGATTTCTCCGCCATCAACGCCATGCCTCTGCGATTGTAATTTCTTCTTTTGTTTTCTCGTCTTTACTCCAAATAGCTCATCCGGAATATTCACACTAAAC
Download sequence region |
Get flanking sequences on PGSC_DMv3_219_ch04
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Ontology terms | None | terms associated with this mRNA |
![]() ![]() | spliced cDNA sequence, including UTRs |
>PGSC0003DMT400025902 Cinnamoyl-CoA reductase
CTCTTGAATGCTTAGTTTGCTAGAGCAGCTTCCTATCTGATTGCATTTTGTGGTTCCAAATGCATGCAGAACTGGTACTGTTTTTCTAAAACAATGGCTGAGAAAGAAGCTTGGTCATATGCAAAGAAAAGTGGACTTGATATGGTAACTGTGCTCCCAGCACTTGTTGTAGGGCCAATGTTACAGAAGACAACAAATGCAAGTAGCTTGGCTCTCATTAAGCTGCTGAAAGAAGGATACGAAGAGCTGGAAAACAAGAAACGGTTTTTGGTAGACGTACGTGATGTAGCTGAAGCCTTACTGCTAGTGTATGAGAGACCTGAAGCTGAAGGTAGATACTTGTGTGCAGCTCATACTGTGAAATCAGAAGATTTAGTTGCTATGCTGAAGAAACACTATCCCAACTACTACTATCCTAAATGTTTTACCGATATGATGGAGGATACAAGTTTTAGTTCAGAGAAGTTGCAGAAGTTGGGTTGGCAATATAGGCCACTGGAGGAAACTCTAGTTGATGCAGTTGAAAGTTACAAACAAAAGGGCTTTCTGGATTGAAGTTTGCTTGTTGTAATACTTTGTACTAAATAATTGCTCTGCATGTCTTTCAAGTTCATACACTTGCAAACTATTACCTATAATACATAGTCTGGAATAAGGAGGTTACACTATACCCCTTTTGAGTTCTATTTAGTTGTTTTATTTTGCTCTCAGTTGGGGGTACAGATTGCTCTCAACTTATTCAAGTACAACCTTGTATTTCTATTCCTAGAGCTTATGAGAATGTATCTTTAGTAGCTGGTGTTTCTAGTGAAGGTGCTTGGCG
CTCTTGAATGCTTAGTTTGCTAGAGCAGCTTCCTATCTGATTGCATTTTGTGGTTCCAAATGCATGCAGAACTGGTACTGTTTTTCTAAAACAATGGCTGAGAAAGAAGCTTGGTCATATGCAAAGAAAAGTGGACTTGATATGGTAACTGTGCTCCCAGCACTTGTTGTAGGGCCAATGTTACAGAAGACAACAAATGCAAGTAGCTTGGCTCTCATTAAGCTGCTGAAAGAAGGATACGAAGAGCTGGAAAACAAGAAACGGTTTTTGGTAGACGTACGTGATGTAGCTGAAGCCTTACTGCTAGTGTATGAGAGACCTGAAGCTGAAGGTAGATACTTGTGTGCAGCTCATACTGTGAAATCAGAAGATTTAGTTGCTATGCTGAAGAAACACTATCCCAACTACTACTATCCTAAATGTTTTACCGATATGATGGAGGATACAAGTTTTAGTTCAGAGAAGTTGCAGAAGTTGGGTTGGCAATATAGGCCACTGGAGGAAACTCTAGTTGATGCAGTTGAAAGTTACAAACAAAAGGGCTTTCTGGATTGAAGTTTGCTTGTTGTAATACTTTGTACTAAATAATTGCTCTGCATGTCTTTCAAGTTCATACACTTGCAAACTATTACCTATAATACATAGTCTGGAATAAGGAGGTTACACTATACCCCTTTTGAGTTCTATTTAGTTGTTTTATTTTGCTCTCAGTTGGGGGTACAGATTGCTCTCAACTTATTCAAGTACAACCTTGTATTTCTATTCCTAGAGCTTATGAGAATGTATCTTTAGTAGCTGGTGTTTCTAGTGAAGGTGCTTGGCG
![]() ![]() | translated polypeptide sequence |
>PGSC0003DMT400025902 Cinnamoyl-CoA reductase
MAEKEAWSYAKKSGLDMVTVLPALVVGPMLQKTTNASSLALIKLLKEGYEELENKKRFLVDVRDVAEALLLVYERPEAEGRYLCAAHTVKSEDLVAMLKKHYPNYYYPKCFTDMMEDTSFSSEKLQKLGWQYRPLEETLVDAVESYKQKGFLD*
MAEKEAWSYAKKSGLDMVTVLPALVVGPMLQKTTNASSLALIKLLKEGYEELENKKRFLVDVRDVAEALLLVYERPEAEGRYLCAAHTVKSEDLVAMLKKHYPNYYYPKCFTDMMEDTSFSSEKLQKLGWQYRPLEETLVDAVESYKQKGFLD*
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Ontology terms | None | terms associated with this mRNA |
![]() ![]() | spliced cDNA sequence, including UTRs |
>PGSC0003DMT400025903 Cinnamoyl-CoA reductase
GTTTAGTGTGAATATTCCGGATGAGCTATTTGGAGTAAAGACGAGAAAACAAAAGAAGAAATTACAATCGCAGAGGCATGGCGTTGATGGCGGAGAAATCCAGAGTGTGTGTAACTGGCGCAGGTGGATACGTGGCTTCATCGCTAGTGAAGCTTCTCCTTTCTAAAGACTACATTGTTCATGGCACCGTCAGAGATCCTTATCCCTAAGAAATCAATCTCAATTCCATTTAATTTGCAGCTGATGACAAGTATGCTCATTTGAAGAACCTTGATAAAGCTGCTGACAACCTTAAGCTCTTCAAGGCAGACTTGCTAGATCCCAACTCGCTTGCTGGAGCCATCAAAGGATGCAATGGAGTATTTCATGTTGCTTGTCCAGTTCCTTCGGGCTCTGTACCAAATCCCGAGGTAGAACTTGTTGAGCCTGCAGTGAACGGCACACTTAATGTTCTGAAGGCATGCTCTGAAGAAAACATCAGGAGGGTTGTGTTTGTGTCTTCTGTTGCTGCTGCTTCCTTGGACCCCAACTGGCCGAAGGGCCAAGTGAAGGACGAGACTTGTTGGTCGGACAGTGAATACTGCAAAGCAACTAATAACTGGTACTGTTTTTCTAAAACAATGGCTGAGAAAGAAGCTTGGTCATATGCAAAGAAAAGTGGACTTGATATGGTAACTGTGCTCCCAGCACTTGTTGTAGGGCCAATGTTACAGAAGACAACAAATGCAAGTAGCTTGGCTCTCATTAAGCTGCTGAAAGAAGGATACGAAGAGCTGGAAAACAAGAAACGGTTTTTGGTAGACGTACGTGATGTAGCTGAAGCCTTACTGCTAGTGTATGAGAGACCTGAAGCTGAAGGTAGATACTTGTGTGCAGCTCATACTGTGAAATCAGAAGATTTAGTTGCTATGCTGAAGAAACACTATCCCAACTACTACTATCCTAAATGTTTTACCGATATGATGGAGGATACAAGTTTTAGTTCAGAGAAGTTGCAGAAGTTGGGTTGGCAATATAGGCCACTGGAGGAAACTCTAGTTGATGCAGTTGAAAGTTACAAACAAAAGGGCTTTCTGGATTGAAGTTTGCTTGTTGTAATACTTTGTACTAAATAATTGCTCTGCATGTCTTTCAAGTTCATACACTTGCAAACTATTACCTATAATACATAGTCTGGAATAAGGAGGTTACACTATACCCCTTTTGAGTTCTATTTAGTTGTTTTATTTTGCTCTCAGTTGGGGGTACAGATTGCTCTCAACTTATTCAAGTACAACCTTGTATTTCTATTCCTAGAGCTTATGAGAATGTATCTTTAGTAGCTGGTGTTTCTAGTGAAGGTGCTTGGCG
GTTTAGTGTGAATATTCCGGATGAGCTATTTGGAGTAAAGACGAGAAAACAAAAGAAGAAATTACAATCGCAGAGGCATGGCGTTGATGGCGGAGAAATCCAGAGTGTGTGTAACTGGCGCAGGTGGATACGTGGCTTCATCGCTAGTGAAGCTTCTCCTTTCTAAAGACTACATTGTTCATGGCACCGTCAGAGATCCTTATCCCTAAGAAATCAATCTCAATTCCATTTAATTTGCAGCTGATGACAAGTATGCTCATTTGAAGAACCTTGATAAAGCTGCTGACAACCTTAAGCTCTTCAAGGCAGACTTGCTAGATCCCAACTCGCTTGCTGGAGCCATCAAAGGATGCAATGGAGTATTTCATGTTGCTTGTCCAGTTCCTTCGGGCTCTGTACCAAATCCCGAGGTAGAACTTGTTGAGCCTGCAGTGAACGGCACACTTAATGTTCTGAAGGCATGCTCTGAAGAAAACATCAGGAGGGTTGTGTTTGTGTCTTCTGTTGCTGCTGCTTCCTTGGACCCCAACTGGCCGAAGGGCCAAGTGAAGGACGAGACTTGTTGGTCGGACAGTGAATACTGCAAAGCAACTAATAACTGGTACTGTTTTTCTAAAACAATGGCTGAGAAAGAAGCTTGGTCATATGCAAAGAAAAGTGGACTTGATATGGTAACTGTGCTCCCAGCACTTGTTGTAGGGCCAATGTTACAGAAGACAACAAATGCAAGTAGCTTGGCTCTCATTAAGCTGCTGAAAGAAGGATACGAAGAGCTGGAAAACAAGAAACGGTTTTTGGTAGACGTACGTGATGTAGCTGAAGCCTTACTGCTAGTGTATGAGAGACCTGAAGCTGAAGGTAGATACTTGTGTGCAGCTCATACTGTGAAATCAGAAGATTTAGTTGCTATGCTGAAGAAACACTATCCCAACTACTACTATCCTAAATGTTTTACCGATATGATGGAGGATACAAGTTTTAGTTCAGAGAAGTTGCAGAAGTTGGGTTGGCAATATAGGCCACTGGAGGAAACTCTAGTTGATGCAGTTGAAAGTTACAAACAAAAGGGCTTTCTGGATTGAAGTTTGCTTGTTGTAATACTTTGTACTAAATAATTGCTCTGCATGTCTTTCAAGTTCATACACTTGCAAACTATTACCTATAATACATAGTCTGGAATAAGGAGGTTACACTATACCCCTTTTGAGTTCTATTTAGTTGTTTTATTTTGCTCTCAGTTGGGGGTACAGATTGCTCTCAACTTATTCAAGTACAACCTTGTATTTCTATTCCTAGAGCTTATGAGAATGTATCTTTAGTAGCTGGTGTTTCTAGTGAAGGTGCTTGGCG
![]() ![]() | translated polypeptide sequence |
>PGSC0003DMT400025903 Cinnamoyl-CoA reductase
MAEKEAWSYAKKSGLDMVTVLPALVVGPMLQKTTNASSLALIKLLKEGYEELENKKRFLVDVRDVAEALLLVYERPEAEGRYLCAAHTVKSEDLVAMLKKHYPNYYYPKCFTDMMEDTSFSSEKLQKLGWQYRPLEETLVDAVESYKQKGFLD*
MAEKEAWSYAKKSGLDMVTVLPALVVGPMLQKTTNASSLALIKLLKEGYEELENKKRFLVDVRDVAEALLLVYERPEAEGRYLCAAHTVKSEDLVAMLKKHYPNYYYPKCFTDMMEDTSFSSEKLQKLGWQYRPLEETLVDAVESYKQKGFLD*
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Ontology terms | None | terms associated with this mRNA |
![]() ![]() | spliced cDNA sequence, including UTRs |
>PGSC0003DMT400025904 Cinnamoyl-CoA reductase
GTTTAGTGTGAATATTCCGGATGAGCTATTTGGAGTAAAGACGAGAAAACAAAAGAAGAAATTACAATCGCAGAGGCATGGCGTTGATGGCGGAGAAATCCAGAGTGTGTGTAACTGGCGCAGGTGGATACGTGGCTTCATCGCTAGTGAAGCTTCTCCTTTCTAAAGACTACATTGTTCATGGCACCGTCAGAGATCCTTCTGATGACAAGTATGCTCATTTGAAGAACCTTGATAAAGCTGCTGACAACCTTAAGCTCTTCAAGGCAGACTTGCTAGATCCCAACTCGCTTGCTGGAGCCATCAAAGGATGCAATGGAGTATTTCATGTTGCTTGTCCAGTTCCTTCGGGCTCTGTACCAAATCCCGAGGTAGAACTTGTTGAGCCTGCAGTGAACGGCACACTTAATGTTCTGAAGGCATGCTCTGAAGAAAACATCAGGAGGGTTGTGTTTGTGTCTTCTGTTGCTGCTGCTTCCTTGGACCCCAACTGGCCGAAGGGCCAAGTGAAGGACGAGACTTGTTGGTCGGACAGTGAATACTGCAAAGCAACTAATAACTGGTACTGTTTTTCTAAAACAATGGCTGAGAAAGAAGCTTGGTCATATGCAAAGAAAAGTGGACTTGATATGGTAACTGTGCTCCCAGCACTTGTTGTAGGGCCAATGTTACAGAAGACAACAAATGCAAGTAGCTTGGCTCTCATTAAGCTGCTGAAAGAAGGATACGAAGAGCTGGAAAACAAGAAACGGTTTTTGGTAGACGTACGTGATGTAGCTGAAGCCTTACTGCTAGTGTATGAGAGACCTGAAGCTGAAGGTAGATACTTGTGTGCAGCTCATACTGTGAAATCAGAAGATTTAGTTGCTATGCTGAAGAAACACTATCCCAACTACTACTATCCTAAATGTTTTACCGATATGATGGAGGATACAAGTTTTAGTTCAGAGAAGTTGCAGAAGTTGGGTTGGCAATATAGGCCACTGGAGGAAACTCTAGTTGATGCAGTTGAAAGTTACAAACAAAAGGGCTTTCTGGATTGAAGTTTGCTTGTTGTAATACTTTGTACTAAATAATTGCTCTGCATGTCTTTCAAGTTCATACACTTGCAAACTATTACCTATAATACATAGTCTGGAATAAGGAGGTTACACTATACCCCTTTTGAGTTCTATTTAGTTGTTTTATTTTGCTCTCAGTTGGGGGTACAGATTGCTCTCAACTTATTCAAGTACAACCTTGTATTTCTATTCCTAGAGCTTATGAGAATGTATCTTTAGTAGCTGGTGTTTCTAGTGAAGGTGCTTGGCG
GTTTAGTGTGAATATTCCGGATGAGCTATTTGGAGTAAAGACGAGAAAACAAAAGAAGAAATTACAATCGCAGAGGCATGGCGTTGATGGCGGAGAAATCCAGAGTGTGTGTAACTGGCGCAGGTGGATACGTGGCTTCATCGCTAGTGAAGCTTCTCCTTTCTAAAGACTACATTGTTCATGGCACCGTCAGAGATCCTTCTGATGACAAGTATGCTCATTTGAAGAACCTTGATAAAGCTGCTGACAACCTTAAGCTCTTCAAGGCAGACTTGCTAGATCCCAACTCGCTTGCTGGAGCCATCAAAGGATGCAATGGAGTATTTCATGTTGCTTGTCCAGTTCCTTCGGGCTCTGTACCAAATCCCGAGGTAGAACTTGTTGAGCCTGCAGTGAACGGCACACTTAATGTTCTGAAGGCATGCTCTGAAGAAAACATCAGGAGGGTTGTGTTTGTGTCTTCTGTTGCTGCTGCTTCCTTGGACCCCAACTGGCCGAAGGGCCAAGTGAAGGACGAGACTTGTTGGTCGGACAGTGAATACTGCAAAGCAACTAATAACTGGTACTGTTTTTCTAAAACAATGGCTGAGAAAGAAGCTTGGTCATATGCAAAGAAAAGTGGACTTGATATGGTAACTGTGCTCCCAGCACTTGTTGTAGGGCCAATGTTACAGAAGACAACAAATGCAAGTAGCTTGGCTCTCATTAAGCTGCTGAAAGAAGGATACGAAGAGCTGGAAAACAAGAAACGGTTTTTGGTAGACGTACGTGATGTAGCTGAAGCCTTACTGCTAGTGTATGAGAGACCTGAAGCTGAAGGTAGATACTTGTGTGCAGCTCATACTGTGAAATCAGAAGATTTAGTTGCTATGCTGAAGAAACACTATCCCAACTACTACTATCCTAAATGTTTTACCGATATGATGGAGGATACAAGTTTTAGTTCAGAGAAGTTGCAGAAGTTGGGTTGGCAATATAGGCCACTGGAGGAAACTCTAGTTGATGCAGTTGAAAGTTACAAACAAAAGGGCTTTCTGGATTGAAGTTTGCTTGTTGTAATACTTTGTACTAAATAATTGCTCTGCATGTCTTTCAAGTTCATACACTTGCAAACTATTACCTATAATACATAGTCTGGAATAAGGAGGTTACACTATACCCCTTTTGAGTTCTATTTAGTTGTTTTATTTTGCTCTCAGTTGGGGGTACAGATTGCTCTCAACTTATTCAAGTACAACCTTGTATTTCTATTCCTAGAGCTTATGAGAATGTATCTTTAGTAGCTGGTGTTTCTAGTGAAGGTGCTTGGCG
![]() ![]() | translated polypeptide sequence |
>PGSC0003DMT400025904 Cinnamoyl-CoA reductase
MALMAEKSRVCVTGAGGYVASSLVKLLLSKDYIVHGTVRDPSDDKYAHLKNLDKAADNLKLFKADLLDPNSLAGAIKGCNGVFHVACPVPSGSVPNPEVELVEPAVNGTLNVLKACSEENIRRVVFVSSVAAASLDPNWPKGQVKDETCWSDSEYCKATNNWYCFSKTMAEKEAWSYAKKSGLDMVTVLPALVVGPMLQKTTNASSLALIKLLKEGYEELENKKRFLVDVRDVAEALLLVYERPEAEGRYLCAAHTVKSEDLVAMLKKHYPNYYYPKCFTDMMEDTSFSSEKLQKLGWQYRPLEETLVDAVESYKQKGFLD*
MALMAEKSRVCVTGAGGYVASSLVKLLLSKDYIVHGTVRDPSDDKYAHLKNLDKAADNLKLFKADLLDPNSLAGAIKGCNGVFHVACPVPSGSVPNPEVELVEPAVNGTLNVLKACSEENIRRVVFVSSVAAASLDPNWPKGQVKDETCWSDSEYCKATNNWYCFSKTMAEKEAWSYAKKSGLDMVTVLPALVVGPMLQKTTNASSLALIKLLKEGYEELENKKRFLVDVRDVAEALLLVYERPEAEGRYLCAAHTVKSEDLVAMLKKHYPNYYYPKCFTDMMEDTSFSSEKLQKLGWQYRPLEETLVDAVESYKQKGFLD*
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AY149609 Solanum tuberosum cultivar Kuras cinnamoyl CoA reductase 2 mRNA, partial cds.
Other genome matches | None |
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Molecular cloning and characterization of cDNAs encoding cinnamoyl CoA reductase (CCR) from barley (Hordeum vulgare) and potato (Solanum tuberosum).
Journal of plant physiology (2004)
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Cinnamoyl CoA reductase catalyzes the reduction of cinnamic acid CoA esters into their corresponding aldehydes, the first step of the phenylpropanoid pathway specifically dedicated to monolignol biosynthesis. Two cDNA clones encoding cinnamoyl CoA reductase (CCR) have been isolated from Hordeum vulgare (HvCCR) and Solanum tuberosum (StCCR1). Amino acid sequence alignment revealed the motif, NWYCY, representing the active site of CCR, conserved in both the encoded HvCCR and StCCR1 amino acid sequences. The HvCCR encoded protein possesses substantial homology with CCRs isolated and cloned form other sources; the highest identity (89%) was observed with CCR from fescue (Festuca arundicinea). Expression analysis by RT-PCR demonstrated that the HvCCR gene is expressed in barley stem and root tissue while no expression is detected in leaves and flowers. This expression pattern suggests that HvCCR is involved in constitutive lignification. Transcripts of StCCR1 were detected in potato root, leaf and also in stem although at a very low level.
Larsen, K.
Journal of plant physiology.
2004.
161(1).
105-12.
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