This site uses cookies to provide logins and other features. Please accept the use of cookies by clicking Accept.
Tomato locus asparagine synthetase 1
| Locus details | Download GMOD XML | Note to Editors | Annotation guidelines |
[loading edit links...]
|
[loading...]
|
|
Links to external databases
Links to external databases
|
| Registry name: | None | [Associate registry name] |
Notes and figures (0)
Notes and figures (0)
| [Add notes, figures or images] |
Success
The display image was set successfully.
| Image | Description | Type |
|---|
Accessions and images (0)
Accessions and images (0)
| [Associate accession] |
Accession name:
Would you Like to specify an allele?
| Alleles (0) | None | [Add new Allele] |
Associated loci (1)
Associated loci (1)
| [Associate new locus] |
[loading...]
|
Associated loci - graphical view
Associated loci - graphical view
| View asparagine synthetase 1 relationships in the stand-alone network browser |
[loading...] | [Legend] [Levels] |
SolCyc links
SolCyc links
|
[loading...]
Sequence annotations
Sequence annotations
|
Genome features
Genome features
|
Genomic sequence
Genomic sequence
| unprocessed genomic sequence region underlying this gene |
>Solyc06g007180.2 SL2.50ch06:1242525..1237837 (sequence from reverse strand)
CACACAATTCCATTTGTACGCAAATTCACTAACTACGTGTTCTTTTTCTCCAAAAATCTTGCATATTTTTCTCTGTTCTGTTTATTATTATCTAGTTTCAATTTGAAATATCTTTATTTACAAAAAAAGAAACATTTAAAAAATTCGTAAATTTTTTTTTTTACTAAACATTATTTTTTAAAAAAAATCGAAGTATTTGATCAATAATCATGTGTGGAATTTTGGCTTTGTTGGGTTGTTCGGATGATTCTCAGGCTAAAAGGGTTCGAGTTCTTGAGCTTTCTCGCAGGCAAATTATTTTCTCCTTTCATTTTTCGATAAATTATTTATACATGTTATATGATCTAAATCAAAATTATTAATTTATGTCGAATTCGTAGTTTTTAATGATAGATCTGTGTATGCATTGAAGGGTTATTGACACTTATGTCCTTATGTTGTTTTTCTTTTTTTTTTCACTCACGGGGCATAAGTATATATTTTTTTGTATTATAATTCATGGGGCATTAGTGTTAGAGATTATTAGTGGGATATAAGTAAATAAAATTAATGTTCCTATAGTATTTTTTTTTTTGCGCATTGAGCTGGCGATACAGACATTTAAAATTTAGAGCTTATTTCTTTTAAATATATTTATTTGAAATAAATGAATTCGTGAAATTTGATTTTCTAGTAGAGTTTTATGTTGTATATATGTATGTATTGTGCCCTTTGTTTAATGTTTTTGCATTGTTTTAGTCAATCGATAATAAATTTAATTGTATTTTTTTAGTTATATTCATATGAAAAAAATTGAAATTCATAATATTTTTTTTTATAATTTAAAAATCAAATTAATGTAATTTTAAAAATTAATCAGATTAATTTTTAAAAAATATAACATGATAGACCCAAAAAGAAAAGTTTATTTTGATGTAACTAACTTGAGTTGACACCTGGCAGTGATTTTTTGGATACTTGAATAAAAATAACACTAGAAATTTTTTTATGGATACTTTGTGATAATTATTTATTCCTAACGTGGGATATAAAATCTCTAGATTGATTATTAAATTATTCTTAGACCAACCATCATGTCTTGTTCATGATGTTGATGGGGAACAAAGCCTTAATAGTTTACATAACATAGTATTTTTGTTTCACGAGTCTTAGCAGGGGCAGATTCAGAATTTATTAGAATTTTTACGTAAATCGTACAATGGGTTAAAAGTCTAACCTATCAAGATTAAAATTTTGTATACGACTTTTAGAAGTGACGATATTGAACAGAAATTTAATTTTGTAACGATAGGTTGAAGCATCGCGGACCGGATTGGAGTGGAATATTTCAATATGGTGATTTTTATTTAGCACATCAACGTCTAGCAATTATCGACCCTGCTTCTGGTGATCAACCTCTGTTTAATGAAGACAAAAAGATTGTTGTTACTGTGAGTATGCCCTCCACTGTTGTTCAGACTCTTCAAAAATGTTATCGTGCATGCCTGTGTCATGTCTTACGAAAATGTGTTATTTTTGAAGGATCTGACATGCACTAGTCGATATTTTTGGAGAGTTTGGAAGCAACATATAGTTTTAGACTATATAAAGATGAACAATTTTGATGATTAATTTTGTGTCGAATTTTGCAGGTTAATGGAGAGATCTACAATCATGAAAAACTTCGAAAACTTATGCCTAATCACAAGTTTAGGACTGGGAGTGATTGTGATGTTATTGCTCATCTTGTGAGTATATAGTCTTAAATTAGGCTAGTGAATTATAATAGAAAAATCGGGTGTTTTAGATACGTTTATAAGCTGGTTAAATTGACTTATTAGTAATTTTTTGGTTTACTTGAGTTTTTATATATGTGTTGATCAGTATGAAGAGTATGGAGAAAATTTTGTTGACATGTTGGATGGAGTGTTCTCTTTCGTACTATTGGATACTCGCGATAATAGCTTTCTTGCTGCTCGTGATGCCATTGGAATTACACCCCTCTATATTGGTTGGGGACTTGATGGTAAGATACAATATGTTGCTCGTAGTCATCAAAAATGTCGATACAAGTGCATTATTTTTGGAGGGTCTGAACAGAAATAACAAACTAGAAGTGATATATGTTATTGTGTGTCACAGGATCTGTGTGGATATCATCTGAGCTAAAGGGCTTGAATGATGATTGTGAACATTTTGAAGTTTTCCCTCCGGGGCACTTGTACTCGAGCAAGAACGGAGGGCTTAGGAGATGGTACAATCCCGCTTGGTTCTCCGAGGCTATTCCTTCCACTCCTTACGACACTTTGGTTCTGAGGCGCGCCTTTGAAAATGTGAGTAATTGTTATTATTTGGTATTAGTATTGTTTATCTGTCGAGTTTGGGTCTTAGTAACCGAGAAGTCTGTCTGTACAAATGATCTTAATGAGTGGTGGTGATTTTGTAGGCTGTTATCAAACGGTTGATGACTGATGTCCCCTTTGGTGTTCTGCTCTCGGGGGGACTTGATTCGTCTTTGGTTGCTTCTGTAACTGCTCGATACTTGGCTGGAACGAAAGCTGCTAAGCAATGGGGAGCACAACTTCATTCATTCTGTGTTGGTCTCGAGGTGAGTCAGTTCAGAAGCGGATCAAGAATTTAAACTTGATGGTTTCAACCTATACGTGCCCGTTTTATCACTTGTGCATCTATAAATATGTGTGTTTTATGATTGAACAGGGTTCACCAGATCTTAAGGCTGCGAAAGAAGTTGCTGACTTTTTAGGAACCGTTCACCACGAGTTTCACTTCACTGTTCAGGTTTGTAAATCGAGGTGTTACTTTGATTTTGATCTGTGTTCTGTTTTTTCATGTTGTCAAACAACGCATTTCATTTCTGCAGGACGGGATTGATGCTATTGAAGATGTTATATATCATATCGAAACGTATGATGTAACAACAATAAGAGCAAGCACTCCTATGTTCCTTATGTCGCGTAAGATCAAATCACTAGGAGTGAAGATGGTCATATCAGGAGAAGGCGCTGACGAAATTTTTGGTGGCTACTTATACTTCCACAAGGCTCCCAACAAGGAGGAGTTCCACAGGGAAACATGTCGCAAGGTAATAAATCATTCTTGGAGTATTGCCTTTTTTGAAAACCTCGTTGAAACAGGACGAGTTAAAAAAAATGCTGATCCTGTTCTTCATGTTTACGCGCAGATAAAAGCTCTTCACCAGTATGACTGTTTAAGAGCAAACAAGGCAACGTCTGCGTGGGGCTTAGAAGCTAGAGTACCATTTCTGGATAAAGAGTTCATCAATGTTGCCATGAGTATCGATCCCGAGTGGAAGATGGTAAGAAATTAAACTTGAATTGCCAACATTTTACTATGACAACTATGGTTTTTGTGGAACAGATCTTTTATATGTTCTCGATAACAACATTTTTCTATAGCAACCAAAAGATATCTCATTGTAACGGTGTTGTACTGGGGTTTGACTGTAACTTGTTTCGTCCATTTTAGATTAAACATGATCAAGGAAGGATCGAGAAGTGGGTTCTTAGGAAGGCGTTTGATGATGAGGAGCAACCGTATCTTCCAAAGGTCGAAAGTCATATAATTCGTGCTGATTTGCCAATAGTTATGGGTTAAAACTAACATGTCTGTCCTGTTTTTTGTGCCCTGCAGCATATTCTGTACAGGCAGAAAGAACAATTCAGCGATGGCGTAGGCTATAGTTGGATCGATGGGCTCAAAGCACATGCTGAACAACATGTTAGCTCACTATTACAAGCATTATCTTTCATATTCGTTGTTGTTTTTCATTATGTTAGCTCACTATTACAAGCATTATCTTTCATATTCGTTGTTGTTTTTCACTATGTCGAATGATCTTGTATACGATTTTGTGTCTCTTAGGTGACTGATAGGATGATGCTTAATGCTGCTCATATCTTCCCACACAACACTCCGACTACGAAAGAAGGATACTATTACAGAATGATTTTCGACAGGTTCTTCCCACAGGTAATACTAGGCAGGCGAGCTCCTAAAATCAAAACACTAGCACCATATACGAAAGTTTAAAGTTGCAGACTTTGTCTTGAAACACTAATACCATATCGGTTGTTGGATTTGCAGAACTCAGCGAGCCTGACAGTTCCTGGAGGACCGAGTATAGCTTGTAGCACGGCTAAAGCAATCGAGTGGGATGCTTCTTGGTCGAACAACCTTGATCCTTCTGGTAGGGCTGCTATCGGTGTACATAACTCTGCTTATGACAACCATCTATCCGGTGTTGCTAATGGGAATTTGGACACCCCGATCATCAGTAACATGCCAAGGATGGTAGGCGTTGGCGTGGCTGCAGAGCTCACAATAAGAAGCTAACTAGCACTAGTCTCTTGCTGTCCATGACTCGATGTTTGAAATATTAGTATTATTGTTGTTGTTGTTGTTGTTATTATAGGAAGAAGCAGCATGTCTTTTAGATATCCTGCTGCATAGAAAGAGCATTGGGTCAATGTTTTAACTAGAATAAAAAAAACCAAAACCATATAGAGGTTTTGAAGATCTTGAGCACCACTATTGTTCCTAGTTGGTGCTTGTGTCTAATTGTACTGTTTTCCCTTTTACCACAACTCTATTGGCACTATATAGAGTGTCCTTCTGGACTTTGTAATATTGGTATATGTAAAGTTCTGGTTATAGTCATCCTTCTTGTTT
CACACAATTCCATTTGTACGCAAATTCACTAACTACGTGTTCTTTTTCTCCAAAAATCTTGCATATTTTTCTCTGTTCTGTTTATTATTATCTAGTTTCAATTTGAAATATCTTTATTTACAAAAAAAGAAACATTTAAAAAATTCGTAAATTTTTTTTTTTACTAAACATTATTTTTTAAAAAAAATCGAAGTATTTGATCAATAATCATGTGTGGAATTTTGGCTTTGTTGGGTTGTTCGGATGATTCTCAGGCTAAAAGGGTTCGAGTTCTTGAGCTTTCTCGCAGGCAAATTATTTTCTCCTTTCATTTTTCGATAAATTATTTATACATGTTATATGATCTAAATCAAAATTATTAATTTATGTCGAATTCGTAGTTTTTAATGATAGATCTGTGTATGCATTGAAGGGTTATTGACACTTATGTCCTTATGTTGTTTTTCTTTTTTTTTTCACTCACGGGGCATAAGTATATATTTTTTTGTATTATAATTCATGGGGCATTAGTGTTAGAGATTATTAGTGGGATATAAGTAAATAAAATTAATGTTCCTATAGTATTTTTTTTTTTGCGCATTGAGCTGGCGATACAGACATTTAAAATTTAGAGCTTATTTCTTTTAAATATATTTATTTGAAATAAATGAATTCGTGAAATTTGATTTTCTAGTAGAGTTTTATGTTGTATATATGTATGTATTGTGCCCTTTGTTTAATGTTTTTGCATTGTTTTAGTCAATCGATAATAAATTTAATTGTATTTTTTTAGTTATATTCATATGAAAAAAATTGAAATTCATAATATTTTTTTTTATAATTTAAAAATCAAATTAATGTAATTTTAAAAATTAATCAGATTAATTTTTAAAAAATATAACATGATAGACCCAAAAAGAAAAGTTTATTTTGATGTAACTAACTTGAGTTGACACCTGGCAGTGATTTTTTGGATACTTGAATAAAAATAACACTAGAAATTTTTTTATGGATACTTTGTGATAATTATTTATTCCTAACGTGGGATATAAAATCTCTAGATTGATTATTAAATTATTCTTAGACCAACCATCATGTCTTGTTCATGATGTTGATGGGGAACAAAGCCTTAATAGTTTACATAACATAGTATTTTTGTTTCACGAGTCTTAGCAGGGGCAGATTCAGAATTTATTAGAATTTTTACGTAAATCGTACAATGGGTTAAAAGTCTAACCTATCAAGATTAAAATTTTGTATACGACTTTTAGAAGTGACGATATTGAACAGAAATTTAATTTTGTAACGATAGGTTGAAGCATCGCGGACCGGATTGGAGTGGAATATTTCAATATGGTGATTTTTATTTAGCACATCAACGTCTAGCAATTATCGACCCTGCTTCTGGTGATCAACCTCTGTTTAATGAAGACAAAAAGATTGTTGTTACTGTGAGTATGCCCTCCACTGTTGTTCAGACTCTTCAAAAATGTTATCGTGCATGCCTGTGTCATGTCTTACGAAAATGTGTTATTTTTGAAGGATCTGACATGCACTAGTCGATATTTTTGGAGAGTTTGGAAGCAACATATAGTTTTAGACTATATAAAGATGAACAATTTTGATGATTAATTTTGTGTCGAATTTTGCAGGTTAATGGAGAGATCTACAATCATGAAAAACTTCGAAAACTTATGCCTAATCACAAGTTTAGGACTGGGAGTGATTGTGATGTTATTGCTCATCTTGTGAGTATATAGTCTTAAATTAGGCTAGTGAATTATAATAGAAAAATCGGGTGTTTTAGATACGTTTATAAGCTGGTTAAATTGACTTATTAGTAATTTTTTGGTTTACTTGAGTTTTTATATATGTGTTGATCAGTATGAAGAGTATGGAGAAAATTTTGTTGACATGTTGGATGGAGTGTTCTCTTTCGTACTATTGGATACTCGCGATAATAGCTTTCTTGCTGCTCGTGATGCCATTGGAATTACACCCCTCTATATTGGTTGGGGACTTGATGGTAAGATACAATATGTTGCTCGTAGTCATCAAAAATGTCGATACAAGTGCATTATTTTTGGAGGGTCTGAACAGAAATAACAAACTAGAAGTGATATATGTTATTGTGTGTCACAGGATCTGTGTGGATATCATCTGAGCTAAAGGGCTTGAATGATGATTGTGAACATTTTGAAGTTTTCCCTCCGGGGCACTTGTACTCGAGCAAGAACGGAGGGCTTAGGAGATGGTACAATCCCGCTTGGTTCTCCGAGGCTATTCCTTCCACTCCTTACGACACTTTGGTTCTGAGGCGCGCCTTTGAAAATGTGAGTAATTGTTATTATTTGGTATTAGTATTGTTTATCTGTCGAGTTTGGGTCTTAGTAACCGAGAAGTCTGTCTGTACAAATGATCTTAATGAGTGGTGGTGATTTTGTAGGCTGTTATCAAACGGTTGATGACTGATGTCCCCTTTGGTGTTCTGCTCTCGGGGGGACTTGATTCGTCTTTGGTTGCTTCTGTAACTGCTCGATACTTGGCTGGAACGAAAGCTGCTAAGCAATGGGGAGCACAACTTCATTCATTCTGTGTTGGTCTCGAGGTGAGTCAGTTCAGAAGCGGATCAAGAATTTAAACTTGATGGTTTCAACCTATACGTGCCCGTTTTATCACTTGTGCATCTATAAATATGTGTGTTTTATGATTGAACAGGGTTCACCAGATCTTAAGGCTGCGAAAGAAGTTGCTGACTTTTTAGGAACCGTTCACCACGAGTTTCACTTCACTGTTCAGGTTTGTAAATCGAGGTGTTACTTTGATTTTGATCTGTGTTCTGTTTTTTCATGTTGTCAAACAACGCATTTCATTTCTGCAGGACGGGATTGATGCTATTGAAGATGTTATATATCATATCGAAACGTATGATGTAACAACAATAAGAGCAAGCACTCCTATGTTCCTTATGTCGCGTAAGATCAAATCACTAGGAGTGAAGATGGTCATATCAGGAGAAGGCGCTGACGAAATTTTTGGTGGCTACTTATACTTCCACAAGGCTCCCAACAAGGAGGAGTTCCACAGGGAAACATGTCGCAAGGTAATAAATCATTCTTGGAGTATTGCCTTTTTTGAAAACCTCGTTGAAACAGGACGAGTTAAAAAAAATGCTGATCCTGTTCTTCATGTTTACGCGCAGATAAAAGCTCTTCACCAGTATGACTGTTTAAGAGCAAACAAGGCAACGTCTGCGTGGGGCTTAGAAGCTAGAGTACCATTTCTGGATAAAGAGTTCATCAATGTTGCCATGAGTATCGATCCCGAGTGGAAGATGGTAAGAAATTAAACTTGAATTGCCAACATTTTACTATGACAACTATGGTTTTTGTGGAACAGATCTTTTATATGTTCTCGATAACAACATTTTTCTATAGCAACCAAAAGATATCTCATTGTAACGGTGTTGTACTGGGGTTTGACTGTAACTTGTTTCGTCCATTTTAGATTAAACATGATCAAGGAAGGATCGAGAAGTGGGTTCTTAGGAAGGCGTTTGATGATGAGGAGCAACCGTATCTTCCAAAGGTCGAAAGTCATATAATTCGTGCTGATTTGCCAATAGTTATGGGTTAAAACTAACATGTCTGTCCTGTTTTTTGTGCCCTGCAGCATATTCTGTACAGGCAGAAAGAACAATTCAGCGATGGCGTAGGCTATAGTTGGATCGATGGGCTCAAAGCACATGCTGAACAACATGTTAGCTCACTATTACAAGCATTATCTTTCATATTCGTTGTTGTTTTTCATTATGTTAGCTCACTATTACAAGCATTATCTTTCATATTCGTTGTTGTTTTTCACTATGTCGAATGATCTTGTATACGATTTTGTGTCTCTTAGGTGACTGATAGGATGATGCTTAATGCTGCTCATATCTTCCCACACAACACTCCGACTACGAAAGAAGGATACTATTACAGAATGATTTTCGACAGGTTCTTCCCACAGGTAATACTAGGCAGGCGAGCTCCTAAAATCAAAACACTAGCACCATATACGAAAGTTTAAAGTTGCAGACTTTGTCTTGAAACACTAATACCATATCGGTTGTTGGATTTGCAGAACTCAGCGAGCCTGACAGTTCCTGGAGGACCGAGTATAGCTTGTAGCACGGCTAAAGCAATCGAGTGGGATGCTTCTTGGTCGAACAACCTTGATCCTTCTGGTAGGGCTGCTATCGGTGTACATAACTCTGCTTATGACAACCATCTATCCGGTGTTGCTAATGGGAATTTGGACACCCCGATCATCAGTAACATGCCAAGGATGGTAGGCGTTGGCGTGGCTGCAGAGCTCACAATAAGAAGCTAACTAGCACTAGTCTCTTGCTGTCCATGACTCGATGTTTGAAATATTAGTATTATTGTTGTTGTTGTTGTTGTTATTATAGGAAGAAGCAGCATGTCTTTTAGATATCCTGCTGCATAGAAAGAGCATTGGGTCAATGTTTTAACTAGAATAAAAAAAACCAAAACCATATAGAGGTTTTGAAGATCTTGAGCACCACTATTGTTCCTAGTTGGTGCTTGTGTCTAATTGTACTGTTTTCCCTTTTACCACAACTCTATTGGCACTATATAGAGTGTCCTTCTGGACTTTGTAATATTGGTATATGTAAAGTTCTGGTTATAGTCATCCTTCTTGTTT
| Download sequence region |
Get flanking sequences on SL2.50ch06
|
mRNA Solyc06g007180.2.1
mRNA Solyc06g007180.2.1
|
Ontology terms
Ontology terms
| terms associated with this mRNA |
cDNA sequence
cDNA sequence
| spliced cDNA sequence, including UTRs |
>Solyc06g007180.2.1 Asparagine synthase (Glutamine-hydrolyzing) (AHRD V1 **** A9EDI4_9FLAO); contains Interpro domain(s) IPR006426 Asparagine synthase, glutamine-hydrolyzing
CACACAATTCCATTTGTACGCAAATTCACTAACTACGTGTTCTTTTTCTCCAAAAATCTTGCATATTTTTCTCTGTTCTGTTTATTATTATCTAGTTTCAATTTGAAATATCTTTATTTACAAAAAAAGAAACATTTAAAAAATTCGTAAATTTTTTTTTTTACTAAACATTATTTTTTAAAAAAAATCGAAGTATTTGATCAATAATCATGTGTGGAATTTTGGCTTTGTTGGGTTGTTCGGATGATTCTCAGGCTAAAAGGGTTCGAGTTCTTGAGCTTTCTCGCAGGTTGAAGCATCGCGGACCGGATTGGAGTGGAATATTTCAATATGGTGATTTTTATTTAGCACATCAACGTCTAGCAATTATCGACCCTGCTTCTGGTGATCAACCTCTGTTTAATGAAGACAAAAAGATTGTTGTTACTGTTAATGGAGAGATCTACAATCATGAAAAACTTCGAAAACTTATGCCTAATCACAAGTTTAGGACTGGGAGTGATTGTGATGTTATTGCTCATCTTTATGAAGAGTATGGAGAAAATTTTGTTGACATGTTGGATGGAGTGTTCTCTTTCGTACTATTGGATACTCGCGATAATAGCTTTCTTGCTGCTCGTGATGCCATTGGAATTACACCCCTCTATATTGGTTGGGGACTTGATGGATCTGTGTGGATATCATCTGAGCTAAAGGGCTTGAATGATGATTGTGAACATTTTGAAGTTTTCCCTCCGGGGCACTTGTACTCGAGCAAGAACGGAGGGCTTAGGAGATGGTACAATCCCGCTTGGTTCTCCGAGGCTATTCCTTCCACTCCTTACGACACTTTGGTTCTGAGGCGCGCCTTTGAAAATGCTGTTATCAAACGGTTGATGACTGATGTCCCCTTTGGTGTTCTGCTCTCGGGGGGACTTGATTCGTCTTTGGTTGCTTCTGTAACTGCTCGATACTTGGCTGGAACGAAAGCTGCTAAGCAATGGGGAGCACAACTTCATTCATTCTGTGTTGGTCTCGAGGGTTCACCAGATCTTAAGGCTGCGAAAGAAGTTGCTGACTTTTTAGGAACCGTTCACCACGAGTTTCACTTCACTGTTCAGGACGGGATTGATGCTATTGAAGATGTTATATATCATATCGAAACGTATGATGTAACAACAATAAGAGCAAGCACTCCTATGTTCCTTATGTCGCGTAAGATCAAATCACTAGGAGTGAAGATGGTCATATCAGGAGAAGGCGCTGACGAAATTTTTGGTGGCTACTTATACTTCCACAAGGCTCCCAACAAGGAGGAGTTCCACAGGGAAACATGTCGCAAGATAAAAGCTCTTCACCAGTATGACTGTTTAAGAGCAAACAAGGCAACGTCTGCGTGGGGCTTAGAAGCTAGAGTACCATTTCTGGATAAAGAGTTCATCAATGTTGCCATGAGTATCGATCCCGAGTGGAAGATGATTAAACATGATCAAGGAAGGATCGAGAAGTGGGTTCTTAGGAAGGCGTTTGATGATGAGGAGCAACCGTATCTTCCAAAGCATATTCTGTACAGGCAGAAAGAACAATTCAGCGATGGCGTAGGCTATAGTTGGATCGATGGGCTCAAAGCACATGCTGAACAACATGTGACTGATAGGATGATGCTTAATGCTGCTCATATCTTCCCACACAACACTCCGACTACGAAAGAAGGATACTATTACAGAATGATTTTCGACAGGTTCTTCCCACAGAACTCAGCGAGCCTGACAGTTCCTGGAGGACCGAGTATAGCTTGTAGCACGGCTAAAGCAATCGAGTGGGATGCTTCTTGGTCGAACAACCTTGATCCTTCTGGTAGGGCTGCTATCGGTGTACATAACTCTGCTTATGACAACCATCTATCCGGTGTTGCTAATGGGAATTTGGACACCCCGATCATCAGTAACATGCCAAGGATGGTAGGCGTTGGCGTGGCTGCAGAGCTCACAATAAGAAGCTAACTAGCACTAGTCTCTTGCTGTCCATGACTCGATGTTTGAAATATTAGTATTATTGTTGTTGTTGTTGTTGTTATTATAGGAAGAAGCAGCATGTCTTTTAGATATCCTGCTGCATAGAAAGAGCATTGGGTCAATGTTTTAACTAGAATAAAAAAAACCAAAACCATATAGAGGTTTTGAAGATCTTGAGCACCACTATTGTTCCTAGTTGGTGCTTGTGTCTAATTGTACTGTTTTCCCTTTTACCACAACTCTATTGGCACTATATAGAGTGTCCTTCTGGACTTTGTAATATTGGTATATGTAAAGTTCTGGTTATAGTCATCCTTCTTGTTT
CACACAATTCCATTTGTACGCAAATTCACTAACTACGTGTTCTTTTTCTCCAAAAATCTTGCATATTTTTCTCTGTTCTGTTTATTATTATCTAGTTTCAATTTGAAATATCTTTATTTACAAAAAAAGAAACATTTAAAAAATTCGTAAATTTTTTTTTTTACTAAACATTATTTTTTAAAAAAAATCGAAGTATTTGATCAATAATCATGTGTGGAATTTTGGCTTTGTTGGGTTGTTCGGATGATTCTCAGGCTAAAAGGGTTCGAGTTCTTGAGCTTTCTCGCAGGTTGAAGCATCGCGGACCGGATTGGAGTGGAATATTTCAATATGGTGATTTTTATTTAGCACATCAACGTCTAGCAATTATCGACCCTGCTTCTGGTGATCAACCTCTGTTTAATGAAGACAAAAAGATTGTTGTTACTGTTAATGGAGAGATCTACAATCATGAAAAACTTCGAAAACTTATGCCTAATCACAAGTTTAGGACTGGGAGTGATTGTGATGTTATTGCTCATCTTTATGAAGAGTATGGAGAAAATTTTGTTGACATGTTGGATGGAGTGTTCTCTTTCGTACTATTGGATACTCGCGATAATAGCTTTCTTGCTGCTCGTGATGCCATTGGAATTACACCCCTCTATATTGGTTGGGGACTTGATGGATCTGTGTGGATATCATCTGAGCTAAAGGGCTTGAATGATGATTGTGAACATTTTGAAGTTTTCCCTCCGGGGCACTTGTACTCGAGCAAGAACGGAGGGCTTAGGAGATGGTACAATCCCGCTTGGTTCTCCGAGGCTATTCCTTCCACTCCTTACGACACTTTGGTTCTGAGGCGCGCCTTTGAAAATGCTGTTATCAAACGGTTGATGACTGATGTCCCCTTTGGTGTTCTGCTCTCGGGGGGACTTGATTCGTCTTTGGTTGCTTCTGTAACTGCTCGATACTTGGCTGGAACGAAAGCTGCTAAGCAATGGGGAGCACAACTTCATTCATTCTGTGTTGGTCTCGAGGGTTCACCAGATCTTAAGGCTGCGAAAGAAGTTGCTGACTTTTTAGGAACCGTTCACCACGAGTTTCACTTCACTGTTCAGGACGGGATTGATGCTATTGAAGATGTTATATATCATATCGAAACGTATGATGTAACAACAATAAGAGCAAGCACTCCTATGTTCCTTATGTCGCGTAAGATCAAATCACTAGGAGTGAAGATGGTCATATCAGGAGAAGGCGCTGACGAAATTTTTGGTGGCTACTTATACTTCCACAAGGCTCCCAACAAGGAGGAGTTCCACAGGGAAACATGTCGCAAGATAAAAGCTCTTCACCAGTATGACTGTTTAAGAGCAAACAAGGCAACGTCTGCGTGGGGCTTAGAAGCTAGAGTACCATTTCTGGATAAAGAGTTCATCAATGTTGCCATGAGTATCGATCCCGAGTGGAAGATGATTAAACATGATCAAGGAAGGATCGAGAAGTGGGTTCTTAGGAAGGCGTTTGATGATGAGGAGCAACCGTATCTTCCAAAGCATATTCTGTACAGGCAGAAAGAACAATTCAGCGATGGCGTAGGCTATAGTTGGATCGATGGGCTCAAAGCACATGCTGAACAACATGTGACTGATAGGATGATGCTTAATGCTGCTCATATCTTCCCACACAACACTCCGACTACGAAAGAAGGATACTATTACAGAATGATTTTCGACAGGTTCTTCCCACAGAACTCAGCGAGCCTGACAGTTCCTGGAGGACCGAGTATAGCTTGTAGCACGGCTAAAGCAATCGAGTGGGATGCTTCTTGGTCGAACAACCTTGATCCTTCTGGTAGGGCTGCTATCGGTGTACATAACTCTGCTTATGACAACCATCTATCCGGTGTTGCTAATGGGAATTTGGACACCCCGATCATCAGTAACATGCCAAGGATGGTAGGCGTTGGCGTGGCTGCAGAGCTCACAATAAGAAGCTAACTAGCACTAGTCTCTTGCTGTCCATGACTCGATGTTTGAAATATTAGTATTATTGTTGTTGTTGTTGTTGTTATTATAGGAAGAAGCAGCATGTCTTTTAGATATCCTGCTGCATAGAAAGAGCATTGGGTCAATGTTTTAACTAGAATAAAAAAAACCAAAACCATATAGAGGTTTTGAAGATCTTGAGCACCACTATTGTTCCTAGTTGGTGCTTGTGTCTAATTGTACTGTTTTCCCTTTTACCACAACTCTATTGGCACTATATAGAGTGTCCTTCTGGACTTTGTAATATTGGTATATGTAAAGTTCTGGTTATAGTCATCCTTCTTGTTT
Protein sequence
Protein sequence
| translated polypeptide sequence |
>Solyc06g007180.2.1 Asparagine synthase (Glutamine-hydrolyzing) (AHRD V1 **** A9EDI4_9FLAO); contains Interpro domain(s) IPR006426 Asparagine synthase, glutamine-hydrolyzing
MCGILALLGCSDDSQAKRVRVLELSRRLKHRGPDWSGIFQYGDFYLAHQRLAIIDPASGDQPLFNEDKKIVVTVNGEIYNHEKLRKLMPNHKFRTGSDCDVIAHLYEEYGENFVDMLDGVFSFVLLDTRDNSFLAARDAIGITPLYIGWGLDGSVWISSELKGLNDDCEHFEVFPPGHLYSSKNGGLRRWYNPAWFSEAIPSTPYDTLVLRRAFENAVIKRLMTDVPFGVLLSGGLDSSLVASVTARYLAGTKAAKQWGAQLHSFCVGLEGSPDLKAAKEVADFLGTVHHEFHFTVQDGIDAIEDVIYHIETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEGADEIFGGYLYFHKAPNKEEFHRETCRKIKALHQYDCLRANKATSAWGLEARVPFLDKEFINVAMSIDPEWKMIKHDQGRIEKWVLRKAFDDEEQPYLPKHILYRQKEQFSDGVGYSWIDGLKAHAEQHVTDRMMLNAAHIFPHNTPTTKEGYYYRMIFDRFFPQNSASLTVPGGPSIACSTAKAIEWDASWSNNLDPSGRAAIGVHNSAYDNHLSGVANGNLDTPIISNMPRMVGVGVAAELTIRS*
MCGILALLGCSDDSQAKRVRVLELSRRLKHRGPDWSGIFQYGDFYLAHQRLAIIDPASGDQPLFNEDKKIVVTVNGEIYNHEKLRKLMPNHKFRTGSDCDVIAHLYEEYGENFVDMLDGVFSFVLLDTRDNSFLAARDAIGITPLYIGWGLDGSVWISSELKGLNDDCEHFEVFPPGHLYSSKNGGLRRWYNPAWFSEAIPSTPYDTLVLRRAFENAVIKRLMTDVPFGVLLSGGLDSSLVASVTARYLAGTKAAKQWGAQLHSFCVGLEGSPDLKAAKEVADFLGTVHHEFHFTVQDGIDAIEDVIYHIETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEGADEIFGGYLYFHKAPNKEEFHRETCRKIKALHQYDCLRANKATSAWGLEARVPFLDKEFINVAMSIDPEWKMIKHDQGRIEKWVLRKAFDDEEQPYLPKHILYRQKEQFSDGVGYSWIDGLKAHAEQHVTDRMMLNAAHIFPHNTPTTKEGYYYRMIFDRFFPQNSASLTVPGGPSIACSTAKAIEWDASWSNNLDPSGRAAIGVHNSAYDNHLSGVANGNLDTPIISNMPRMVGVGVAAELTIRS*
Gene model matches
Gene model matches
|
SGN Unigenes
SGN Unigenes
| [Associate new unigene] |
Unigene ID:
[loading...]
GenBank accessions
GenBank accessions
| [Associate new genbank sequence] |
AY240926 Lycopersicon esculentum asparagine synthetase (AS1) mRNA, partial cds.
| Other genome matches | None |
Literature annotations [1]
Literature annotations [1]
| [Associate publication] [Matching publications] |
Up-regulation and localization of asparagine synthetase in tomato leaves infected by the bacterial pathogen Pseudomonas syringae.
Plant & cell physiology (2004)
Show / hide abstract
Show / hide abstract
Nitrogen metabolism is one aspect of basic metabolism, which is still quite unknown in the field of plant-pathogen interactions. Evidence derived from previous studies conducted in our laboratory strongly suggests that during microbial pathogenesis an important nitrogen mobilization process takes place in diseased tissues. Here we describe the expression pattern of asparagine synthetase (AS; EC 6.3.5.4) in tomato leaves infected by the bacterial pathogen Pseudomonas syringae pv. tomato. Using an homologous AS cDNA probe isolated by RT-PCR from infected leaves, we have observed a high level induction of AS expression during the course of infection. Concomitantly, a single AS polypeptide also accumulated in response to bacterial infection. Furthermore, immunohistochemical analysis of AS in infected leaves revealed a strong immunostaining in phloem cells of the main vascular bundles and in secondary veins of the leaf blade. These data correlate with those previously reported for expression of a cytosolic isoform of glutamine synthetase (GS1) also induced during development of the infectious process. Taken together, our results suggest the existence of a GS1/AS pathway representing a metabolic route for transferring ammonium released from protein catabolism into asparagine, an amino acid that may have a major role in nitrogen mobilization from diseased tissues.
Olea, F. Pérez, García. Cantón, FR. Rivera, ME. Cañas, R. Avila, C. Cazorla, FM. Cánovas, FM. de Vicente, A.
Plant & cell physiology.
2004.
45(6).
770-80.
Ontology annotations (7)
Ontology annotations (7)
| [Add ontology annotations] |
[loading...]
Related views
Related views
|
| User comments |
Please wait, checking for comments. (If comments do not show up, access them here)
Your Lists
Public Lists
List Contents
List Validation Report: Failed
Elements not found:
Optional: Add Missing Accessions to A List
Mismatched case
Click the Adjust Case button to align the case in the list with what is in the database.
Multiple mismatched case
Items listed here have mulitple case mismatches and must be fixed manually. If accessions need to be merged, contact the database directly.
List elements matching a synonym
Multiple synonym matches
Fuzzy Search Results
Synonym Search Results
Available Seedlots
Your Datasets
Public Datasets
Dataset Contents
Dataset Validation Failed
Elements not found:
Your Calendar
Having trouble viewing events on the calendar?
Are you associated with the breeding program you are interested in viewing?
Add New Event
Event Info
| Attribute | Value |
|---|---|
| Project Name: | |
| Start Date: | |
| End Date: | |
| Event Type: | |
| Event Description: | |
| Event Web URL: |
Edit Event
Login
Forgot Username
If you've forgotten your username, enter your email address below. An email will be sent with any account username(s) associated with your email address.
Reset Password
To reset your password, please enter your email address. A link will be sent to that address with a link that will enable you to reset your password.
Create New User
Working

Links to external databases
Links to external databases
