Clone Read LE_HBa0049I01_SP6_9984

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0049I01_SP6_9984
Primer
SP6
ID from Seq. Facility
LE_HBa_049_I01-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
753 trimmed for vector and quality, 904 raw
Genbank Accession
Sequence
>LE_HBa0049I01_SP6_9984 (raw untrimmed)
CCTCTCGCTGCATGGTAGNNANNNNGAAAGATTCATGAAAATTACACACAAAAGAGTATTGGTAATTCGAATATCCGTACTATCATCTGAATATCCATTT
ATTTAGTGCAAAATATAGATAATATATTTCTATTTTTAAAAGAGTTGGTATATATGTATATTAGATCGGATTGAATGTTTGCTTAATTATTACTTTCTCC
GCTCATTTTATGTGGCATCATCATTTTCTTTTTGATTAGTCACAAAAAGAATATCACATTTCTTTATATGGTAAGTATTTAAAGGTATAATTTCTCTTAC
CCTTATTGGTTCCACTTAATTTTCTAATACATTTACGAGGAGAGTGAAAAATGAATTACTTTTTTGAAGGGCAATTTGATAAACATTTCAAAATCTTCAT
TATTTCTGAAACTCCGTATCGAATCAAATATTGTCACATAAAATAAAACGAAGAGAGTATTATTTTTCAAAAACTACTTTGCATGTTTTAGCGGGTAGAG
AGAACACATTTTTGACTTAGATATGATAATAAGTAATTAGCTTTGAAATCTAATAAGTTTAATGTAATATAAAATTTCATACACTTCAAATCAGGAATAT
ATTTCATCCTCTACTCCCTCCGTTTTAAAAAGAGTGACATAGTTTAACTTGACATAGAGTTAAAGAAAATAAAGAAAGCTTTTGAATCTTATGGTCCTAA
ATTGAAGTTATGTCAAATGTACAGAATTGCTCTTTAATCTTGTGGTGTTAAACATGTCAAGTGAAAAACTGAAATTAAAATATTGTCAAAAAAAGAAAAA
GATCATTCTTTTTGAAACAGACTAAAAAGGAAAAGGAATATACATTAATTTTTTATAGATCTAATAAGTTTGATGTATGTTCAAATAATAATTTTCGTTT
TATC
>LE_HBa0049I01_SP6_9984 (trimmed for quality and cloning vector)
TTACACACAAAAGAGTATTGGTAATTCGAATATCCGTACTATCATCTGAATATCCATTTATTTAGTGCAAAATATAGATAATATATTTCTATTTTTAAAA
GAGTTGGTATATATGTATATTAGATCGGATTGAATGTTTGCTTAATTATTACTTTCTCCGCTCATTTTATGTGGCATCATCATTTTCTTTTTGATTAGTC
ACAAAAAGAATATCACATTTCTTTATATGGTAAGTATTTAAAGGTATAATTTCTCTTACCCTTATTGGTTCCACTTAATTTTCTAATACATTTACGAGGA
GAGTGAAAAATGAATTACTTTTTTGAAGGGCAATTTGATAAACATTTCAAAATCTTCATTATTTCTGAAACTCCGTATCGAATCAAATATTGTCACATAA
AATAAAACGAAGAGAGTATTATTTTTCAAAAACTACTTTGCATGTTTTAGCGGGTAGAGAGAACACATTTTTGACTTAGATATGATAATAAGTAATTAGC
TTTGAAATCTAATAAGTTTAATGTAATATAAAATTTCATACACTTCAAATCAGGAATATATTTCATCCTCTACTCCCTCCGTTTTAAAAAGAGTGACATA
GTTTAACTTGACATAGAGTTAAAGAAAATAAAGAAAGCTTTTGAATCTTATGGTCCTAAATTGAAGTTATGTCAAATGTACAGAATTGCTCTTTAATCTT
GTGGTGTTAAACATGTCAAGTGAAAAACTGAAATTAAAATATTGTCAAAAAAA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.9131
Expected error %
0.1125
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0049I01
Clone
Clone name
hba-49i1
LE_HBa0049I01
P049I01
Clone type
BAC
Contamination
none
Estimated length
122,816
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found