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Clone Read LE_HBa0141A01_T7_99457

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0141A01_T7_99457
Primer
T7
ID from Seq. Facility
LE_HBa_141_A01-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
6 trimmed for vector and quality, 636 raw
Sequence
>LE_HBa0141A01_T7_99457 (raw untrimmed)
TTTTTGGCGAATCAAGATTTCATTAAAGTTCCCTACAGGGGGGANGGAAGACGAGGGGGGGCGGCANAAGGGGGGGAGGCACGGCCGGGACGCACAGACC
GACGAAGAGCAAGAACACGCAAGACGACGGGAGGGGGAGAGGCCACCCGCCGCCGACCCGCGGGCCCGACAAGGAACCCCAGAACACGCACACCCCAAGC
CCACCCCCCGCGGCAGGGCCCAGAGACAGCAACGAGGAAACCCAAGCGACACGCCACGAGGGAAGACAAAACGAAGAAGAGACAAACACCCAACCCGAGG
AGAGCGACGAAAAAAGGAAAGGGGCGGGAGGAACGGCACGAGCAGGCGCCCCCCCCGGAAGGCACCGCAGAAAAAGCAGGGCGAGAAGAAGGAAGGACGC
ACGCCGGGCGGAACGACGCGCGACCGCCACCAGCCGCGGACAACGCCACACACCACAGGAGACCGCAAGACACAAAAAAAACGAGACACAAACGCCCACA
GGGCAGCAGCCAGCGGAGAACGCCGGAGCCAGCCACCCAGACCGGCGGCGAGAACGGCAAGGAACGCACCACAAGGGGCACCGGGGAACAGCACACCAGG
ACAGCCCAGGCGCGAAGCAGAAGAGACAGACCAACA
>LE_HBa0141A01_T7_99457 (trimmed for quality and cloning vector)
CCCACC

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.64434
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0141A01
Clone
Clone name
hba-141a1
LE_HBa0141A01
P141A01
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found