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Clone Read LE_HBa0126E23_SP6_97388

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0126E23_SP6_97388
Primer
SP6
ID from Seq. Facility
LE_HBa_126_E23-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
6 trimmed for vector and quality, 1299 raw
Sequence
>LE_HBa0126E23_SP6_97388 (raw untrimmed)
ACGTTCCTGCCCTCGATCCATTCCACTAGTTGTCAGAACACAGGACCGCGGACGAATATTGTGATACAGATGGGNAGATAGCGTGTATGCTTGACGATTG
ATAATGTGGCAGCGCCGTGATGAGTTCGGTACCCCCTTCTTGATGAGACAGTAATACTCCACGTATCACTCTCCCTNATTCTCTAGNTGATGGTGCGGCC
CCTTTTACGTAGAAGACCGCCTTCGTGCTACGGNATCAACTGTGAAACTGCGACTGGTGCTAGCACGTAGTAGGAAATATGCAGTTACGAATGCATGACG
GACGGCAGACGACTTGACATATCATTTAATGGTTAGAATATACACTGTCAAGTCGAATGNGTACATGGTTGTGAATGGTGATTAAAGGATCGTAAAGAAG
AGTTGGGTANCATATCGCCCANGGATGTGGGTGAAGTTATATGGATGACGTGGATTGTGGTATTTTGGTTGTGTTGTGATTATATATTGATAGTGTTTGA
GTGTTGATCTAGTGGCGACTGAACGAGAGAAGATTGATGTTGTGAAGTATTATGGTTGCGAGTGGTACATCTCTTGTGAGAGGTTGGGTGATGTGAGCTA
GGGTGATTGATAGTCTGCGTATTGCAATGTGTGTAATGATTAGGTATATTATAACACCCAATCGCATTCGTCGGANCGATACTACTCAACACGAGACTCG
TAGCTTAGTTGGAGGAGGGGGTGGTGGGAGTGTCGGTNCTGAAATGTTGATTTTATTTTTTTTTTGTTCTCGCACACCACATGCGTGATACTAAGTATTA
CANACAATTACTTATATCAGAAGAAATAAGAAAGAGTATTCAATATTTATCTTTCACGTATAAGAGATGACTTTTAGTTGCGAACTTGGTAGCTTTNGAC
TTTATCATCTGAGTACCGGTGTTGAAGCGCAAATTCTACGATGGAGTGCTATGANACTATATAACCTAATACTTAATGCTGAAAGAAATGAAGTGATATG
AGAGATAGATGAGATAAACGATCATATCTTATACTATGGGCATACATGATATTGATTAACATAGGATGAGTAATNAATACTAGTTTGTTTGGGACTATTT
GTATAAGATGTTTATTGTGGTAGACATTTTAACACCACACCTTAGCTTATGGTTCACCTTTGTGTTNAATNCTCTCCTATGATTATATTTGATATATTGT
CTTTGTATGATTGNTTATGATGGGTATGGTCCTATATGTTGAATGTGTTCTCTCTACATTCGGACTGATTATAAATAGTTANTTTATTGTTCGTGANAC
>LE_HBa0126E23_SP6_97388 (trimmed for quality and cloning vector)
TTTTTT

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.259993
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0126E23
Clone
Clone name
hba-126e23
LE_HBa0126E23
P126E23
Clone type
BAC
Contamination
none
Estimated length
95,038
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found