Clone Read LE_HBa0109F16_SP6_96654

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0109F16_SP6_96654
Primer
SP6
ID from Seq. Facility
LE_HBa_109_F16-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
516 trimmed for vector and quality, 824 raw
Genbank Accession
Sequence
>LE_HBa0109F16_SP6_96654 (raw untrimmed)
TTGCCTATAGGGACTTTGACTGAATATCGCATTTTCCCCCCAACTTCCATCTCATGGTGTCAGATCTTTCAACTGGCTCAGAATGCTCCAAGTCCCTGTT
CCTTCATTTGTCTTTTCAACATTCTTGCCGCTCAGATATATGACTCGCGTTCGTTAACATTCAAAATTTCATTTGAATCTGCTGATTTGTTGACTTATCC
AGTTCAATTATTTCCTTCCAATTTCCCATTTCAAAGAATTGTTTGAGCAGAAAAAACCAACTGCATATATCTTATAGAAACTATAAACATGAGTGATAGG
TCTAAAATCCAAAGATCATTATGGTCTGTGTTTTGAATTCCTGTAACTCCCATCTTTTTATGGTTTTGATTGAGAGTACCTCCCAACGAGATGAACACAT
GTGCCCAGGCACACTCAAAATGTTACTCCTTTGTGCCATTTTATAACACATACTTCCCATTTTAATTTGTCCCCAAAAAAGTGACACCTTTCTATATCAG
AAGTAATTTAACTTTAATGTTTTAATTTATTATTACTAATGATATGATTTTATAGCCATTATAAATCTTCATTTTTAAAACAAGTTGTTCAAAGTCTTTT
TTCTTTCTTAACACCTTGGACCCATTCTAACACCTCCACAGAAAATGGGATGGAGAGTGATAATTTCTTGAATTTCGAGGGGAGTTTTTATTGTGGGGAT
AAGTCTTTCGGTATTCCTATATTTTTGTTGTTTTAATTTTTGTCTTTTTCTCTGGATATAATCGAAATTGTCATTTTGTGGGATATATGGAGGTTTTTGG
TTTTCTTTTTTTTTGTTTTTTTTT
>LE_HBa0109F16_SP6_96654 (trimmed for quality and cloning vector)
TCGCATTTTCCCCCCAACTTCCATCTCATGGTGTCAGATCTTTCAACTGGCTCAGAATGCTCCAAGTCCCTGTTCCTTCATTTGTCTTTTCAACATTCTT
GCCGCTCAGATATATGACTCGCGTTCGTTAACATTCAAAATTTCATTTGAATCTGCTGATTTGTTGACTTATCCAGTTCAATTATTTCCTTCCAATTTCC
CATTTCAAAGAATTGTTTGAGCAGAAAAAACCAACTGCATATATCTTATAGAAACTATAAACATGAGTGATAGGTCTAAAATCCAAAGATCATTATGGTC
TGTGTTTTGAATTCCTGTAACTCCCATCTTTTTATGGTTTTGATTGAGAGTACCTCCCAACGAGATGAACACATGTGCCCAGGCACACTCAAAATGTTAC
TCCTTTGTGCCATTTTATAACACATACTTCCCATTTTAATTTGTCCCCAAAAAAGTGACACCTTTCTATATCAGAAGTAATTTAACTTTAATGTTTTAAT
TTATTATTACTAATGA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.942897
Expected error %
0.0772786
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0109F16
Clone
Clone name
hba-109f16
LE_HBa0109F16
P109F16
Clone type
BAC
Contamination
none
Estimated length
97,547
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found