Clone Read LE_HBa0108K21_T7_96137

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0108K21_T7_96137
Primer
T7
ID from Seq. Facility
LE_HBa_108_K21-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
0 trimmed for vector and quality, 793 raw
Sequence
>LE_HBa0108K21_T7_96137 (raw untrimmed)
TAGCTCGGTACCGCGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTGAGTATTCTATAGTGTCACCTAAATAGCTTGGCGTAATCATGGTCATAG
CTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTAAC
TCACATTAATTGCGTTGCGCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGAACCCCTTGCGGCCGC
CCGGGCCGTCGACCAATTCTCATGTTTGACAGCTTATCATCGAATTTCTGCCATTCATCCGCTTATTATCACTTATTCAGGCGTAGCAACCAGGCGTTTA
AGGGCACCAATAACTGCCTTAAAAAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCA
CAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCA
TATTGGCCACGTTTAAATCAAAACTGGTGAAACTCCCCCAGGGATTGGCTGAGACGAAAAACATATTCTCCATAAACCCTTTTAGGGAAATAGGGCCAGG
TTTTCACCGTAACACCCCCACATCTTGCCAATATATGTGTAGAAACTGCCGGAAATCCTCCTTGGTATTTCCTCCAGAGCCGATGAAAATCTT
>LE_HBa0108K21_T7_96137 (trimmed for quality and cloning vector)

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Probable foreign DNA contamination
  • High predicted error rate
  • Low complexity
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, no insert found (only flanking vectors)
Quality trim threshold
14.5
Sequence entropy
not recorded
Expected error %
100
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0108K21
Clone
Clone name
hba-108k21
LE_HBa0108K21
C03HBa0108K21
P108K21
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found