Clone Read LE_HBa0108K15_SP6_96124

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0108K15_SP6_96124
Primer
SP6
ID from Seq. Facility
LE_HBa_108_K15-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
553 trimmed for vector and quality, 860 raw
Genbank Accession
DU057248
Sequence
>LE_HBa0108K15_SP6_96124 (raw untrimmed)
GGTACTCCTCAGGNACTCATGCAGAATCTCTAGCAAACATACCGGGCTATATATTNTGGTTAACTGTCTACAAACAATGGACTTCTTTTTGCTCTACTTA
GAGCATACAAAAAAATAAATGACTTATATTATCCAATTCACTTTTCCGCTTTTACTCTACAACCAACAACGAAAGTGACTGTTATAATATGATGTGAAAG
AATAAGATATTGCCACAAACTTAGTTTAAAAGGAAAAAGTCTCATATGGAAAATACAAGGGGCTCAGCTACACTATCTCATTCTTCTTTATTCTAACCTC
AAAATAACTTTTGCACCTATGAAGTTGCTTTTTATAATTTTAATGTGATACATTGAACTCCTCCTTTGAAAAAATTGAATAAACCACACAACTTCAAAAC
TTTCAACAAATGCAGCAATAGAGAAATAAAACCATATTACTGAATACTGACACAATACTTATGGTGGAATATGTACATTTATCTATCCATTCTCTTGAAA
TCAGAGAACGTTTGAGAAAGGATCTTAAGGTGTCTCCTGTCTACTATTTGGTAAGGAGGGTTTCCTTAACGCCTTCTTTTTCCTTCTCGCTATAGTTCCT
TCACAAAATCTTAACTGGTTGAACTATGTTTCTTTCTTGAAGTTAATAAAATTCACAAAGATAAGTGTATCTAAGTCAGCTCCTTTTTTTCCCATTTCTA
ATAAAAAAACAAGCCTTCGCGCACTCCAAAAATGTCATTGTTCTTCAGTGCACAAAAGGGCAAAAAGTCTATGCCAAATTTTACTTAATTTTTTTTCCCG
GAATTGAGCGAAAATTCAGGGGAATAAAACTCCACTAAACTGCGGTCAATACGTCCATAA
>LE_HBa0108K15_SP6_96124 (trimmed for quality and cloning vector)
AGAATCTCTAGCAAACATACCGGGCTATATATTNTGGTTAACTGTCTACAAACAATGGACTTCTTTTTGCTCTACTTAGAGCATACAAAAAAATAAATGA
CTTATATTATCCAATTCACTTTTCCGCTTTTACTCTACAACCAACAACGAAAGTGACTGTTATAATATGATGTGAAAGAATAAGATATTGCCACAAACTT
AGTTTAAAAGGAAAAAGTCTCATATGGAAAATACAAGGGGCTCAGCTACACTATCTCATTCTTCTTTATTCTAACCTCAAAATAACTTTTGCACCTATGA
AGTTGCTTTTTATAATTTTAATGTGATACATTGAACTCCTCCTTTGAAAAAATTGAATAAACCACACAACTTCAAAACTTTCAACAAATGCAGCAATAGA
GAAATAAAACCATATTACTGAATACTGACACAATACTTATGGTGGAATATGTACATTTATCTATCCATTCTCTTGAAATCAGAGAACGTTTGAGAAAGGA
TCTTAAGGTGTCTCCTGTCTACTATTTGGTAAGGAGGGTTTCCTTAACGCCTT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.946774
Expected error %
0.556129
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0108K15
Clone
Clone name
hba-108k15
LE_HBa0108K15
C03HBa0108K15
P108K15
Clone type
BAC
Contamination
none
Estimated length
31,128
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found