Clone Read LE_HBa0046N24_SP6_94750

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0046N24_SP6_94750
Primer
SP6
ID from Seq. Facility
LE_HBa_046_N24-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
9 trimmed for vector and quality, 727 raw
Sequence
>LE_HBa0046N24_SP6_94750 (raw untrimmed)
CCCCCCTAAAGGGGGGGCCCCCCCCTATTTGGGCAAACAGACAGGGGGGCCCCCTTCAAGGGGGCNCNNNTTTTTGGGGGGGNNNNNNNNNNNNNNNNGG
NNNNNNNNNNNNNGNNNNNGNNNTTTTTTCCCGGGGGGGGGGGGGGTTTTTGNAGGAAAGGGGGGGGGGGGGAGAGAGANNANNAANGGGGGGGGGGGGG
GGGGGAAAANAAANANANNAAAAAAAAAAAAAAAAAAAAAAAGAAAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGG
GGGGGAGGGGGGGAGGGGGGGAGGGAGGGGGGGAAAGGAGGGGAAAGGGGGGGGGGGGGANGAGGGGGAGAAGAAGGGGGGGGAGGGGGGGGGGGGGGAG
AGANAGAAAGAGAGGGGANGGGAGAGGGGGAGGGAAAGGGAGGGGGGGGGGGGGGAGGGGGGAGAAGAGGAGAGGAGGGAGGGGGGGAGGAGGGGAAGAA
GGAAAGGAGGAGAGGAGAGAGAGGGAGAAGGGGGGGGAGGGGAGGGGGAAGGGGGGGGAGGAGGGAGGGGGGGGGAGGAGGGGGGAGGGAGGGGAGGAGG
AGAGGAGGGGGGGGGGGGGGGAGGGGGGGAGGAAAAGGGGGGGGGGGAGGGGGAGGGAGAGAAGGGGGGGAGAAGGAGGGGGGGGGGGGGGGGGGGGAGG
GGGGGAAGGAGGGGGAGGGGGAAGGGA
>LE_HBa0046N24_SP6_94750 (trimmed for quality and cloning vector)
GGGGGGGGG

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.07614
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0046N24
Clone
Clone name
hba-46n24
LE_HBa0046N24
P046N24
Clone type
BAC
Contamination
none
Estimated length
119,630
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found