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Clone Read LE_HBa0046A15_T7_94109

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0046A15_T7_94109
Primer
T7
ID from Seq. Facility
LE_HBa_046_A15-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
4 trimmed for vector and quality, 914 raw
Sequence
>LE_HBa0046A15_T7_94109 (raw untrimmed)
ATTTTTTTTTTTTTTAGGGGGGGAGAGCGAAAATTTAACAACCGAGAAAGAAAGGCGCATTTTAAGGGGGAAGCGAAAAACGAGGGGGGAGGAGACCGCN
CAAACAGGAGGAAGAGAGAAACGGAGAGAGCGAGAATTAGAGGGGGAGCCCCCCCCAGAGCGCAACAAAGAAAGGGGGGGGGAGGGNGGGCAGAGACAAA
GGAACCAAAGGAGGAGGGAAAACGAANGAAAGCGCAAAACNAGGACAGCACCGGCAACACCAAAAAGAACACACACCAGAACGCGCACCCCACGAAGCAA
AGGACAAAGGGCGAAGACAACAAGAAACGAACACAAAACAGAGAGGAAAAGGCAAAGCGAGAGCGAACAGAAAGCAGCGAAAACAAAAGAAAGGGGGGGG
GGGCGAGACAAACAAAGAGACACGGAAAGGCCAAAGCAAACGAAGACAACAGCAAGAGACAGGCAAAGAGAGACGAAAACACAAAGCAACAAGAACAAAG
GGAGAGCGAAGACCAGGCGGAGGGGGCAAGAGCAACACGGCCCACCCGCGAAAGCCCGCGCGCCCACGCAAGGACAAGAACCCCAACCAAGACGACAGGC
GCACCAGCCCGCACGCACCGAACACAACGCCCAAAAGAAAGGCCACCAACGAGCGGCCAACAGCGCGACCGCACGAAAGGGAACGACCCACAAGGCGCGA
ACGACGCAGGGAAAAGGCGGAAAGAAACCGGGAAAAGACGGAGGGCCACGAGCAGAGGACACCGCACGACAAGAGAGAAGAAGCCGAACAGCGAGAACAC
ACGACGAAGCCGCAACCGACCCCCGGACCACCCAACAGNCCAGGCACCCGGCGCGACCGCCGCCAGACACCCGACGCCGCCCGCCCGACCAGACGCCCCA
GCGACCACCCCCCG
>LE_HBa0046A15_T7_94109 (trimmed for quality and cloning vector)
TTTT

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
2.10031
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0046A15
Clone
Clone name
hba-46a15
LE_HBa0046A15
C08HBa0046A15
P046A15
Clone type
BAC
Contamination
none
Estimated length
133,419
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found