Clone Read LE_HBa0047K22_T7_9355

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0047K22_T7_9355
Primer
T7
ID from Seq. Facility
LE_HBa_047_K22-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
3 trimmed for vector and quality, 1103 raw
Sequence
>LE_HBa0047K22_T7_9355 (raw untrimmed)
GCCTACCCCGGGGGCCGGGGGGGGTTTCCTCCTATAAGTCCGAGCCTGGAGGGGCTAGGCAAGCTGTGTTGGAATGTATGTGAGATTTGTTAGCCCCTTT
TAAGAGATTGTTAGAGAGTATGAGAGAAATGATAGGAATCAGATAGTTCCCTATTAGAGATCACGGGTAGAGTATCTCGTGCGTCCCTATAGTTTGGTGT
TCATCTTCCAATATCCATGGTCAAGAGGTGTGGTATCGGGGAGTATCCCTACGAAGGTGCGCTAGGCTACTGAAGTAACATAGTGTGCGTATATGGAGAG
TATGTCTGCAAAGCAATCTAAATAGACGTCATTATGTTCACTCACATATGGATATGTTCGGTAGGTCATCTCGTTACTTCATTATGATTGCTTACTTAGG
TTGGTATTGTGTAGTGTTCACTATCGCACGTAATAATCAAGTCTCTGCTCGGAGCCTACGAAGGATTGAGTAAGATTCAGACTGATTCCGAGAAGTGTAG
TTATGTGTCATTATTATATAATGTTTGAGATATGTTCATAAACCTTCATACGAATTCTGTTCAGTTATTGAGTTATGATGGAGTGGAGGTTATAGTTTTT
GTAGACCTCATCGTACATATGAGTGTATACATACGAGCAGCGAATGTATCAATTTCATAAAATGAACAAGTAAGGATGGTTATAGGATGACCATATTTTT
ATTTCTGGTAAGTCCTTACTTTCCACTAATCCCCTGTATGGATTCGTCAGAGACGAGGGACTCTATTTTATTTTATAGCCTGAGATTAAACTTGACATTT
AATCAGCCCTTGCCAAGTGCACATTGTTACTAATACCATTTGAGGGGATCTGCTCTCTTAGAGACATAGTATCTAGAGTGACATTGGTACCAAATCGTAC
TAAGATTGCCTCGCCATAAATATAATTCACGGAGTTTACATTATCCGACCCATCCCGTTCTATCTTTTGCATTCTTCTATGAATCTCAAAAGCAACATTG
GTTAAAAATCGTTAAATAAAATGCCATCTTTTTGTTTGAAGCAGTTTGTTATTATACAATATTTTATTTCTGTTAGCGTGTGGATAATGTTATGCGCGTA
TTA
>LE_HBa0047K22_T7_9355 (trimmed for quality and cloning vector)
GGG

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.498949
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0047K22
Clone
Clone name
hba-47k22
LE_HBa0047K22
P047K22
Clone type
BAC
Contamination
none
Estimated length
98,133
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found