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Clone Read LE_HBa0043E10_T7_93523

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0043E10_T7_93523
Primer
T7
ID from Seq. Facility
LE_HBa_043_E10-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1209 raw
Sequence
>LE_HBa0043E10_T7_93523 (raw untrimmed)
ATGTAATGTCTATCAGGGCAAGTTGGAGAGTCACAATTTTGGATGTACTCATATTGTGATGACGCCTCGGTCACACGGTCATCGCTGAGGAGACGATAAT
GAAGATCCCCCGTATAAAAGGCCCGCCTCGTTTNNTGTGGATATGAGCACGCGCGGGCGATGGGCGCCCCTTTTAAGTGAGTATGTTGCGTTGATATTTG
GTAGACTGATGGCACGATGGGAGCACAGGTGTTGGTTGCGTCACACGCGTGGAGTGCGTGCACTGACGTGACGGCGGTGTGTGCGTATCATGAAGAGACA
CTATAATGATGCAAATAACTTCGATAAAGGACGACCGAAGAAGTAGTAGAGAATGATGAAGTAGTGAGAACTACTCTTCACTATTGGTTACCCCTCGGCG
CGCCCCGTGTCACACTTATTGGCTAGTTATGCTTAGCAAATGACATCTGTTGCGGCACTTCAGCTCGACAGTTTGTTATGATCAATTGAATTCTTATAGT
AGTAATTGAAATAAGTTCGAATCACGAAATAACAAACACACACAATACAACTCTGACAATATAGGTAATCGACTATGCTCGCGGAAGACCAATGACGTCA
AACCGACACAGAATCTCTATACATATACAATTGATTATTGAACATTTCTATAATTCACAAGAGTATCTTGACACATTAGTTACGTACGGTGCGTCAGCAA
AGTGATAGTGAGAGCGTACATTATTTACACATAAATACCGCTCTGGTGGAGTAGTGCCCATAGACTAATGCGTAAACGTGAGCTTCCGATAAGCATGCGT
CTCTTCATGCAGCGCTACACTTCTTGCATCGTCACTATACCCAACATCCAGATCGACGCAACTTTCTCGCTCATGTCAAAACTGTCTAGCTACGACAACG
CGCTGACGGAACTTATCACCGTTTAATTCTTGCGTATGCTAATTACTGTGCTCTTGAGTATGTCTCCTTTCACTCACTACCAATGAATACGCTGCAGCAC
ATCTCCCTTACAAACACACTCATGTCTCAATGTTCTCTGTATGACTCAGTCGTATAGTTGTGTAGTGTGATTTTAAGAGTAGTTTTACACCAAATAATCG
GTTCGCTGAGATGAAGATGCAAGCACGGGTGTATAATAGTAGATAGCTTACTACATACACATTGTTTATGTAAGGTGTACAGCCAGATGACGTGCCAAAC
CCATAAGCN
>LE_HBa0043E10_T7_93523 (trimmed for quality and cloning vector)
AA

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.02663
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0043E10
Clone
Clone name
hba-43e10
LE_HBa0043E10
C02HBa0043E10
P043E10
Clone type
BAC
Contamination
none
Estimated length
74,188
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found