Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

Clone Read LE_HBa0038M05_SP6_93128

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0038M05_SP6_93128
Primer
SP6
ID from Seq. Facility
LE_HBa_038_M05-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
653 trimmed for vector and quality, 811 raw
Genbank Accession
DU055690
Sequence
>LE_HBa0038M05_SP6_93128 (raw untrimmed)
GGATTACCTACTTCATTTATCTCGTTGGACCAAGACCTTACTTTGTTGGAAGATCCCACCAAATGTTTTTATATATTTAGTTGACTTGATTTCATAGAAC
TTACACCTGATACTCCAGGTCCTCCCTGTTCAACAACAATACAAACCTACTTAGTTCAATCCCACATGTGGGATTTCGGGAGAGTAGAGTGTATGCAAAT
GTTTCCCTTACCTTGTTGATATAGAGGTTTCTTCTGAAATCCCCTCAACTTTAAATAAACTTGCCAATCAATTCGCAAAAGGGAATACAAATACTCGGAC
TAATCTCAATGACACATTTATGTAGAATACCAAGTGTTACACAACAAATAAGTGAAAGAACAGTAACAAAAGTTAAAAAACGCAAGAATCGACAAATAAA
AACTTCAAGTGTAGTGCTAAGAGTATTTTGAAAGACAATCTCTCAAGGAAGCATGAGAATTCTCAATTACCCGCTACCTCAGCTTAGGAAAAACTTAGAC
TTACAAACTAACCTACAGGAATATGTAGTTATGGAATGTCCCTTTGTACTATATATACATATATATATATATATATATATATATATATATATATATATAT
ATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATGTATGTATGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGAGTGTGTGAGTGAGTGAGAGAGTGATATGATGAGAAAAAGTGAAGAAGAGAGAGAGTGAGATGAAAATATTGATATAAATATATGTTTTTA
TTTGTTTTTTA
>LE_HBa0038M05_SP6_93128 (trimmed for quality and cloning vector)
TTTATCTCGTTGGACCAAGACCTTACTTTGTTGGAAGATCCCACCAAATGTTTTTATATATTTAGTTGACTTGATTTCATAGAACTTACACCTGATACTC
CAGGTCCTCCCTGTTCAACAACAATACAAACCTACTTAGTTCAATCCCACATGTGGGATTTCGGGAGAGTAGAGTGTATGCAAATGTTTCCCTTACCTTG
TTGATATAGAGGTTTCTTCTGAAATCCCCTCAACTTTAAATAAACTTGCCAATCAATTCGCAAAAGGGAATACAAATACTCGGACTAATCTCAATGACAC
ATTTATGTAGAATACCAAGTGTTACACAACAAATAAGTGAAAGAACAGTAACAAAAGTTAAAAAACGCAAGAATCGACAAATAAAAACTTCAAGTGTAGT
GCTAAGAGTATTTTGAAAGACAATCTCTCAAGGAAGCATGAGAATTCTCAATTACCCGCTACCTCAGCTTAGGAAAAACTTAGACTTACAAACTAACCTA
CAGGAATATGTAGTTATGGAATGTCCCTTTGTACTATATATACATATATATATATATATATATATATATATATATATATATATATATATATATATATATA
TATATATATATATATATATATATATATATATATATATATATATATATATATAT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.886015
Expected error %
0.0129868
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0038M05
Clone
Clone name
hba-38m5
LE_HBa0038M05
P038M05
Clone type
BAC
Contamination
none
Estimated length
124,234
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found