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Clone Read LE_HBa0047J15_T7_9293

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0047J15_T7_9293
Primer
T7
ID from Seq. Facility
LE_HBa_047_J15-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
280 trimmed for vector and quality, 931 raw
Genbank Accession
DU028410
Sequence
>LE_HBa0047J15_T7_9293 (raw untrimmed)
ACCTTCGGTCACCGCGAGGATCTCCTAGATTNCGACCTGGCAGGCTGGCAAGCTTTTCCTGGGAGAAGTCGCCTTCTGCCCTTTATATCCCTTGTTCTTT
TTNTGAAAAAAGTACCATTTTCCCTGATATCTTCTCTCTTCCCCTATTTTGTTTGTTAATGTCAAAAAAATCACTACTCTTTGTTTGCTGATTAGTCATC
ATTGGGTTATTGATATTGTTAACATGAAGTGTATGTTTTTCTTTGCTTGTCGCCATGAGTTAGTTGTAATGTCGTTTGAGGTTCTACCAAACTCTATCTA
GTATGGTCGTTTCTGTCTTTCTTTTCTCGAATGCATTTTGATGTTCTACTTTCTTGAAACTACTACTTGAGTGTTGTTAAATCGGTATTATCTCGTCTAT
ACTGCCGTCAAGCATAAGGTTCACTAATCGTTTAGGTTATTATTACTAAGTGTTTTTGTTCGCGTGAGTCTTGAGTTAGTTATCATGCAAAAGGGCCTTT
TTGTCCCATTAGAAATCGCTAGCAAGTGTCTGATGTTGATGAATCACATAGTTGACTTCACTGTTTCTTTGTGTCTATCATAAGAATATTTCACTATCCT
TCATCTCGCTTTCACTCTAAATATTAATATCTGCTTTAGTCATGTAGGAGTTGTGACTATAGCTTTGATGAACTATGATAATCTTCATAAGAGATCTCTT
ATCTTTTAATATGTTCGTGAATCAGTGTTACATGAGCTAAATTGATCTTAGTGATCACACAGTGAAGATATCATCCCCTGTACCATATAATTACAGATCA
CGCTAGTATTATTATTAATTGGGCTAGGGAAATAGTGCTGTAGATTTAAAAGCAACTTTGTCCTCAGACAGTCAACCGTTTTTCTGGAGATGACCCACTA
AACTAACACTCTCCTCTAGATATGCACTAAA
>LE_HBa0047J15_T7_9293 (trimmed for quality and cloning vector)
TACCATTTTCCCTGATATCTTCTCTCTTCCCCTATTTTGTTTGTTAATGTCAAAAAAATCACTACTCTTTGTTTGCTGATTAGTCATCATTGGGTTATTG
ATATTGTTAACATGAAGTGTATGTTTTTCTTTGCTTGTCGCCATGAGTTAGTTGTAATGTCGTTTGAGGTTCTACCAAACTCTATCTAGTATGGTCGTTT
CTGTCTTTCTTTTCTCGAATGCATTTTGATGTTCTACTTTCTTGAAACTACTACTTGAGTGTTGTTAAATCGGTATTATC

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.898487
Expected error %
0.569254
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0047J15
Clone
Clone name
hba-47j15
LE_HBa0047J15
C07HBa0047J15
P047J15
Clone type
BAC
Contamination
none
Estimated length
111,669
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found