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Clone Read LE_HBa0047J02_SP6_9266

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0047J02_SP6_9266
Primer
SP6
ID from Seq. Facility
LE_HBa_047_J02-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
719 trimmed for vector and quality, 865 raw
Genbank Accession
DU028386
Sequence
>LE_HBa0047J02_SP6_9266 (raw untrimmed)
CCCTCCACGATGTACGTATGAGATGGTACGTTGTGAGTTGGATGTGTTTTGTATTGTTGTAACATTTTGAGTTCTGAATGTAATTTTTTGTTCCTTGCTT
GGAAGTTTGGATCTCAAGTATTCTTAAGATTCCAGAGTAAACTTATGGAGTTTTCCTTCTTCTTTTACATTATGTGTTCCCAGTTATTTCTGCTGCTTTA
TATTAACCAGTAATTTCACATATTGTAATGAGTGCTTGTTCATGTTATCCATTAAAGAGAAAATTGAATGAAGATTAACTGTTTTATAAAGGAAAGTTTG
AGCTGATTTTTTCAGTATTTACATAGATTTCTGATTGAATTGTTTGATGCTATCACCAAATTTCTGGAATTTTTTTTCTCGAACTCAATTCTGTGCTGCT
TAGGAATTTTTCCTGTTTGTTTCAGATCTTATTAGTCATATTATGGGTCGTTTATAAAGATATCTGTTCATGTCTGGTTTTTGATAGCTCTTGCTTTCTT
CATCTTCTATACTTTTACCCCTCGTCTTATTCCGTTGCAGAAAAAATGTTGACTAAATTTATAAAAGTTTCTTTGAACCTATGATTTTGGTTCGTAGTTG
AATTGTTTTCAGTTGTCAAGTTAAATTTGTCAACTATCTTCTTAATGTTAGTTTTAATCTTCTCTGGGTTTACACCTGTTTATTCTTTGTTTCAGGAATT
AGTAGTGTTCACACTGAACTTTTTTCATAATTTGTAAGCATAGTTTTGTGTGAGTAAAACTTTTTAAATACTTGGTTTGGTTATAAACTAGTGCTCCAGG
TTATTAACCCCCGTAATTTCATTTTATCTATCTACTTAACGACGTAATGCAAGCTTTCGTAGGGA
>LE_HBa0047J02_SP6_9266 (trimmed for quality and cloning vector)
GGTACGTTGTGAGTTGGATGTGTTTTGTATTGTTGTAACATTTTGAGTTCTGAATGTAATTTTTTGTTCCTTGCTTGGAAGTTTGGATCTCAAGTATTCT
TAAGATTCCAGAGTAAACTTATGGAGTTTTCCTTCTTCTTTTACATTATGTGTTCCCAGTTATTTCTGCTGCTTTATATTAACCAGTAATTTCACATATT
GTAATGAGTGCTTGTTCATGTTATCCATTAAAGAGAAAATTGAATGAAGATTAACTGTTTTATAAAGGAAAGTTTGAGCTGATTTTTTCAGTATTTACAT
AGATTTCTGATTGAATTGTTTGATGCTATCACCAAATTTCTGGAATTTTTTTTCTCGAACTCAATTCTGTGCTGCTTAGGAATTTTTCCTGTTTGTTTCA
GATCTTATTAGTCATATTATGGGTCGTTTATAAAGATATCTGTTCATGTCTGGTTTTTGATAGCTCTTGCTTTCTTCATCTTCTATACTTTTACCCCTCG
TCTTATTCCGTTGCAGAAAAAATGTTGACTAAATTTATAAAAGTTTCTTTGAACCTATGATTTTGGTTCGTAGTTGAATTGTTTTCAGTTGTCAAGTTAA
ATTTGTCAACTATCTTCTTAATGTTAGTTTTAATCTTCTCTGGGTTTACACCTGTTTATTCTTTGTTTCAGGAATTAGTAGTGTTCACACTGAACTTTTT
TCATAATTTGTAAGCATAG

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.911534
Expected error %
0.126413
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0047J02
Clone
Clone name
hba-47j2
LE_HBa0047J02
C08HBa0047J02
P047J02
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found