Clone Read LE_HBa0029G22_T7_92107

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0029G22_T7_92107
Primer
T7
ID from Seq. Facility
LE_HBa_029_G22-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
745 trimmed for vector and quality, 807 raw
Genbank Accession
DU054511
Sequence
>LE_HBa0029G22_T7_92107 (raw untrimmed)
GCCGGGGACCCGGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTCATCCTTGTATTTTGCAGTACAAACTCCATTCAGGATCTGGCCTTTAAGG
ATTCCATTCACTGATAGTATTCTCTTTGCTTGCTCCTCCTCCTCCTCCTCTTTCTCTTCTAGTGAAACTTCACCTAGAGGAAATCTGATGGTTGCTCTTG
GCTGCAGCAGGATTTTTATCGAATGAATGAGACAAAAATGTTAAATAAAGCACAGATAGAGCCAAAACTCAGATGCCAGTCTTCGTCAAACATAAGATAC
TAATAACATTCTGAAAATCTAAGCTTTCTCATCACTGTCCCAACAGAAAGGTAAGATTTTATTGTGTAGCACAGCTGCGCAACAGTATACAATGCTATAT
CTATCAGTAATGAAGTGCCAATCCATATGTTTAGACCCAAGCTTAGAAGCCGCAAGTACTGTAACCTCAGTATTACATTCCCTGTAATCTTCTCAAAGTT
AAACCAGGAACCATAGTCAATATAATCAACCTACAGAATGTTGATAATATCTTCAACAGTAATTTTTCTCAAAGATAACCTCGAATCCGAATCGAATACT
GTACATAGAGATAAAGTCATACCTTGCCAATTGCCGGAACAGCAGAAGACAACTCAAACTTGTAAGCTGGACCTGCCAGATCAGCTACCATTGCCAGTTC
TCCTTGTTGCGACTAGTATGACCAAAAAAAATGTGAGCGATAAGTGGTATTGGTGCTCATAAAGCATGAAAACAGAAACAATCATATCACATACTAAATA
GTAATCC
>LE_HBa0029G22_T7_92107 (trimmed for quality and cloning vector)
AGCTTCATCCTTGTATTTTGCAGTACAAACTCCATTCAGGATCTGGCCTTTAAGGATTCCATTCACTGATAGTATTCTCTTTGCTTGCTCCTCCTCCTCC
TCCTCTTTCTCTTCTAGTGAAACTTCACCTAGAGGAAATCTGATGGTTGCTCTTGGCTGCAGCAGGATTTTTATCGAATGAATGAGACAAAAATGTTAAA
TAAAGCACAGATAGAGCCAAAACTCAGATGCCAGTCTTCGTCAAACATAAGATACTAATAACATTCTGAAAATCTAAGCTTTCTCATCACTGTCCCAACA
GAAAGGTAAGATTTTATTGTGTAGCACAGCTGCGCAACAGTATACAATGCTATATCTATCAGTAATGAAGTGCCAATCCATATGTTTAGACCCAAGCTTA
GAAGCCGCAAGTACTGTAACCTCAGTATTACATTCCCTGTAATCTTCTCAAAGTTAAACCAGGAACCATAGTCAATATAATCAACCTACAGAATGTTGAT
AATATCTTCAACAGTAATTTTTCTCAAAGATAACCTCGAATCCGAATCGAATACTGTACATAGAGATAAAGTCATACCTTGCCAATTGCCGGAACAGCAG
AAGACAACTCAAACTTGTAAGCTGGACCTGCCAGATCAGCTACCATTGCCAGTTCTCCTTGTTGCGACTAGTATGACCAAAAAAAATGTGAGCGATAAGT
GGTATTGGTGCTCATAAAGCATGAAAACAGAAACAATCATATCAC

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.97148
Expected error %
0.664964
Sequence Annotations 
Automatic Annotations
Arabidopsis proteins (TAIR10) (ath/ATH_pep)NCBI BLAST
At2g43950.2 Score 65 E Value 3e-11 Identity 20.90% Align. Length 152bp (20.40%) Frame 2
68415.m05465 expressed protein
Arabidopsis proteins (TAIR10) (ath/ATH_pep)NCBI BLAST
At2g43950.3 Score 65 E Value 3e-11 Identity 20.90% Align. Length 152bp (20.40%) Frame 2
68415.m05464 expressed protein
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0029G22
Clone
Clone name
hba-29g22
LE_HBa0029G22
P029G22
Clone type
BAC
Contamination
none
Estimated length
92,565
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found