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Clone Read LE_HBa0047G10_SP6_9138

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0047G10_SP6_9138
Primer
SP6
ID from Seq. Facility
LE_HBa_047_G10-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
789 trimmed for vector and quality, 930 raw
Genbank Accession
Sequence
>LE_HBa0047G10_SP6_9138 (raw untrimmed)
TGCTAAAGCTAAAGTNTGACAAAATTCATATTAAATGAGGAACAGAACAACAGGAGATAGCAGAATATGCAATCTTAAAAGATGATTTTTAGTTCACTTT
TTCGGACAGTAGACTTAGCTAGTGGAACTCAAATTTGGAGAGTCCGATTTCTAGTTCACTTATCAGCACATGCGTGGGTGTGATAACATATTTGGAGAGT
CCGATAAACATAGTCAGTGAGGAAAAAAGCACTTGACCATAGACTGCCTTTACAATTCTATTTACTACTATTTTATATGGAAGAACTTGACATGTAATGA
AATTGGAAAGTTACAAGCTATTATCTCATCTGTTGCATCTAACTCATCAAATAGGTCAAACTTTAACATCATACAAAACTTTCTCTCCATTTTGTTTGCA
CTAACTTCTCCTAATTCTTCTAAAACTTAGGTGAAGCAAGCCTCACTTTCAACAATATCCAAAATCCAACAAGTTGTCCATACCACAAAAACAAATCTTC
TACTTTTATTCTGTTATTGCTAGTAACAGTTAGCAGAAAAGACTCTCACAAGTTACTGCTCCCAGTCCACCCGTTCTAGACTTGAAAAATATATCTTATA
TCTCCAATTTCTAAGGCATATGATTTATTTTCTATTTAGTGCAACTCAAACTACAAAGCAAGTTTAACAAATTCATAATACGAGCTGATCCCAAAACAAC
TAAGCAATATTGAACTAATGTTTCTGATCTATACTTGAAAAATGCACTAGACAAACAACAAAATGACTTCTAGACACTTCAAGACATGTAGTCGAAAAAA
GAAAAATTTTACCAGCAAATAGCTACAAGACAGAATCAATGTTGTAAACAAGGAACAAACCCAGCTTAAGACGAGCACATCATGAACTCAGGAAGACTAA
AAAGACTAAAAAACAGTAACTTTAAACATA
>LE_HBa0047G10_SP6_9138 (trimmed for quality and cloning vector)
GGAACAGAACAACAGGAGATAGCAGAATATGCAATCTTAAAAGATGATTTTTAGTTCACTTTTTCGGACAGTAGACTTAGCTAGTGGAACTCAAATTTGG
AGAGTCCGATTTCTAGTTCACTTATCAGCACATGCGTGGGTGTGATAACATATTTGGAGAGTCCGATAAACATAGTCAGTGAGGAAAAAAGCACTTGACC
ATAGACTGCCTTTACAATTCTATTTACTACTATTTTATATGGAAGAACTTGACATGTAATGAAATTGGAAAGTTACAAGCTATTATCTCATCTGTTGCAT
CTAACTCATCAAATAGGTCAAACTTTAACATCATACAAAACTTTCTCTCCATTTTGTTTGCACTAACTTCTCCTAATTCTTCTAAAACTTAGGTGAAGCA
AGCCTCACTTTCAACAATATCCAAAATCCAACAAGTTGTCCATACCACAAAAACAAATCTTCTACTTTTATTCTGTTATTGCTAGTAACAGTTAGCAGAA
AAGACTCTCACAAGTTACTGCTCCCAGTCCACCCGTTCTAGACTTGAAAAATATATCTTATATCTCCAATTTCTAAGGCATATGATTTATTTTCTATTTA
GTGCAACTCAAACTACAAAGCAAGTTTAACAAATTCATAATACGAGCTGATCCCAAAACAACTAAGCAATATTGAACTAATGTTTCTGATCTATACTTGA
AAAATGCACTAGACAAACAACAAAATGACTTCTAGACACTTCAAGACATGTAGTCGAAAAAAGAAAAATTTTACCAGCAAATAGCTACA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.943449
Expected error %
0.0250764
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0047G10
Clone
Clone name
hba-47g10
LE_HBa0047G10
C08HBa0047G10
P047G10
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found