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Clone Read LE_HBa0007D04_T7_91159

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0007D04_T7_91159
Primer
T7
ID from Seq. Facility
LE_HBa_007_D04-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
711 trimmed for vector and quality, 783 raw
Sequence
>LE_HBa0007D04_T7_91159 (raw untrimmed)
GCTCGGAACCGGGGGGTCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTTCCCATATACAAGTTGGTATGCAGACATATCTATGGGAGTCTTATAAGCTG
TCCGGTAGGCCCCCAGAGCATCATCAAGACTCCTTGACCAATCCGTTCTACTAGCATTCACTGTTTTGGACAATATCTGTTTGATCTCCCGATTCGATAC
TTCAACTTGCACACTAGTTTGAGGGTGGTAAGGAGTGGCCACATTATGGCGAACCCCATATTTCTCCAATAACCTCTTGAACAATCTATTGCAGAAGTGC
GAGCCCCCATCACTAATAATGGCCCTTGGGGTGCCAAAATGGGAGAATATATTCTTTTGCAAGAATGCAATGACACTCGTCCCTTCATTGTTTGCGAGGG
CTAAAGCTTCGACCCATTTAGATACATAATCAACTGCTACTAGAATGTACTTCATCTCATGAGAACTCACGAAAGGGCCCATAAAGTCAATACCCCAAAT
ATCAAATAACTCAATCACAAGAATGGGGTTTAGAGGGAGCTCTTGCTTTCTTGAAATACCACCATCTCGTTGACATTTGTCACATGCTTTAGCAAACCCA
TGAGCATCTTGATGAAGAGTTGGCCAATAGTAACCACATTGCAATAACTTGTGAGCGGTTCTGATACCACTGTGATGTCTGCCAACAGGTGAAGAATGGC
ATTCCTCCAACACACTCAACCTTTTCCATTCTGGGCCACAACGCCGAATAAGCCCGTCGGCACAACTCCCTATACAATTATGG
>LE_HBa0007D04_T7_91159 (trimmed for quality and cloning vector)
AGCTTTCCCATATACAAGTTGGTATGCAGACATATCTATGGGAGTCTTATAAGCTGTCCGGTAGGCCCCCAGAGCATCATCAAGACTCCTTGACCAATCC
GTTCTACTAGCATTCACTGTTTTGGACAATATCTGTTTGATCTCCCGATTCGATACTTCAACTTGCACACTAGTTTGAGGGTGGTAAGGAGTGGCCACAT
TATGGCGAACCCCATATTTCTCCAATAACCTCTTGAACAATCTATTGCAGAAGTGCGAGCCCCCATCACTAATAATGGCCCTTGGGGTGCCAAAATGGGA
GAATATATTCTTTTGCAAGAATGCAATGACACTCGTCCCTTCATTGTTTGCGAGGGCTAAAGCTTCGACCCATTTAGATACATAATCAACTGCTACTAGA
ATGTACTTCATCTCATGAGAACTCACGAAAGGGCCCATAAAGTCAATACCCCAAATATCAAATAACTCAATCACAAGAATGGGGTTTAGAGGGAGCTCTT
GCTTTCTTGAAATACCACCATCTCGTTGACATTTGTCACATGCTTTAGCAAACCCATGAGCATCTTGATGAAGAGTTGGCCAATAGTAACCACATTGCAA
TAACTTGTGAGCGGTTCTGATACCACTGTGATGTCTGCCAACAGGTGAAGAATGGCATTCCTCCAACACACTCAACCTTTTCCATTCTGGGCCACAACGC
CGAATAAGCCC

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.978124
Expected error %
0.579504
Sequence Annotations 
Automatic Annotations
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAF24529.1| Score 287 E Value 2e-76 Identity 18.90% Align. Length 707bp (99.44%) Frame 2
F7F22.15 [Arabidopsis thaliana]
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAF24531.1| Score 286 E Value 3e-76 Identity 19.20% Align. Length 698bp (98.17%) Frame 2
F7F22.17 [Arabidopsis thaliana]
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0007D04
Clone
Clone name
hba-7d4
LE_HBa0007D04
C07HBa0007D04
P007D04
Clone type
BAC
Contamination
none
Estimated length
142,937
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found