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Clone Read LE_HBa0150P23_T7_91005

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0150P23_T7_91005
Primer
T7
ID from Seq. Facility
LE_HBa_150_P23-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
506 trimmed for vector and quality, 779 raw
Genbank Accession
DU059052
Sequence
>LE_HBa0150P23_T7_91005 (raw untrimmed)
TACGCGGCCCCGGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTGTCATAACCGTACATCTGTTCCATATCTTCTACCAAAGGAACATTGATAG
AAAGTTGCTTCAACCTCGTTATAAAACACCGATATTTACCATCCTCGGCCTTTTTTTCACTAATCTTTGAGGAAAGGGGTGGTGGTCTAGGCATGGGAGT
TACCTATATAGGCACCTCAGAATTTTTCTAGTGCTATCTTCTACTTCATCCCTACCCTCTACCGCCTTATCATTATCTTTTATCACCTTTTCCTCCTTAG
ACGGCATAGGTGGGTCAATGGTCTACTTACCACCCTTAGTAGTGATTGCCATATAGTGTCCGTCATTTTTAGAATTTTGGACAGTGTTACTAGGAAGAGT
GCCCGGTTTCCGTTTGCTCACAGTCACAGATAATTGGGCCATTTGCAACTCAATCTGCTTAATCGATATTGCATGTGTATCAACTTTCTTCCCAATACCC
GCTAAAACACTCCTTATGTCTTTATGTTGTCATTATTATCATCTAACCTCCTATTCATTTTGTGTGACATACTCTCAACTCACTCCCATACTAACTCCCC
CATCCCCTATGAATTAACTTCCTCATTTTTTAGGACTGATATTGTGTCTTGTTTCCATTACTTTCTGTTATTATTGCTTCCTTTATTTAATTTTTTTTTT
CCTTTTCAGTTTCTATTTTACTCACTTATGACTTTTCCCTGTTATTTTAGCCCAGCTAATTTATCTTCGCTTTCTCTTA
>LE_HBa0150P23_T7_91005 (trimmed for quality and cloning vector)
AGCTTGTCATAACCGTACATCTGTTCCATATCTTCTACCAAAGGAACATTGATAGAAAGTTGCTTCAACCTCGTTATAAAACACCGATATTTACCATCCT
CGGCCTTTTTTTCACTAATCTTTGAGGAAAGGGGTGGTGGTCTAGGCATGGGAGTTACCTATATAGGCACCTCAGAATTTTTCTAGTGCTATCTTCTACT
TCATCCCTACCCTCTACCGCCTTATCATTATCTTTTATCACCTTTTCCTCCTTAGACGGCATAGGTGGGTCAATGGTCTACTTACCACCCTTAGTAGTGA
TTGCCATATAGTGTCCGTCATTTTTAGAATTTTGGACAGTGTTACTAGGAAGAGTGCCCGGTTTCCGTTTGCTCACAGTCACAGATAATTGGGCCATTTG
CAACTCAATCTGCTTAATCGATATTGCATGTGTATCAACTTTCTTCCCAATACCCGCTAAAACACTCCTTATGTCTTTATGTTGTCATTATTATCATCTA
ACCTCC

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.970393
Expected error %
0.721087
Sequence Annotations 
Automatic Annotations
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAT38730.1| Score 91 E Value 2e-17 Identity 13.40% Align. Length 386bp (76.28%) Frame 3
putative reverse transcriptase [Solanum demissum]
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0150P23
Clone
Clone name
hba-150p23
LE_HBa0150P23
P150P23
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found