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Clone Read LE_HBa0150H03_T7_90581

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0150H03_T7_90581
Primer
T7
ID from Seq. Facility
LE_HBa_150_H03-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
478 trimmed for vector and quality, 848 raw
Genbank Accession
DU058724
Sequence
>LE_HBa0150H03_T7_90581 (raw untrimmed)
CCCGGTACCCTGGTGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTTTTCTTCCGGAACACGTCCAGCCTTCATTTCGCCCCTTATTTCTTCTCTC
TCCCTTTTTGGTAGTGTCTCTTCATGTGACTGTTTGAGCCTATACCACTCCTCACGTTCTCGCTGTCTATCATTCCTCTCCCTCTGAAACACTCCATCTT
CTTTGTGCCTGATATAGAGCTGCTCATCTTCTCGTAGTCTCATCAGCTCATCTCTCTTTCGGTGATCTGAGGCATCATCTCTCTCTCGCTTTCTGCGAAC
CATAGTTTCTCCATGGGAATGGAATGTTTCTTCCTTGTCAATGTGTTCCCTACTTAATTTCACCTCTTCTTTCCTTCTTTTATTGTGGCGATCATCCAAG
GTATCTTACCTCTTCAACTCATCCCTCTCTCTATGCCTTGTTCCCATATCCTTATCATACTCAAGGCCTTATAAATACCGTTCTCCTTTTGTTTTTCGTA
TAAATGGTGTTCTTCTCTATCATTTCACACTAATTTTCTAGCCTTGTAGCGTCGTCCTATTCCATCTTCATCAATAATCTCTTTCTTTCTCTGGATCAAT
ATCTTTTTCTATCCCTTCCTTGTATATTAATCATTCCTTTCCCTGCCTTTTCTTCCTTTACTTTATTCTTCTTCCTTCTTCTATGATTAACTTTTCTATC
ATTCTAAATCTATATTTCTGTATATTCCTTTTTTTATTTTTATTTTTCTTTTTCATTTTTTTTTTTTTCTTTATTTCTATTATCTATTTATAACTTTTTT
TACTATTATCTTTCCTTCTTATTTTTTTTACTCTTACTCCTTTCTTTT
>LE_HBa0150H03_T7_90581 (trimmed for quality and cloning vector)
AGCTTTTTCTTCCGGAACACGTCCAGCCTTCATTTCGCCCCTTATTTCTTCTCTCTCCCTTTTTGGTAGTGTCTCTTCATGTGACTGTTTGAGCCTATAC
CACTCCTCACGTTCTCGCTGTCTATCATTCCTCTCCCTCTGAAACACTCCATCTTCTTTGTGCCTGATATAGAGCTGCTCATCTTCTCGTAGTCTCATCA
GCTCATCTCTCTTTCGGTGATCTGAGGCATCATCTCTCTCTCGCTTTCTGCGAACCATAGTTTCTCCATGGGAATGGAATGTTTCTTCCTTGTCAATGTG
TTCCCTACTTAATTTCACCTCTTCTTTCCTTCTTTTATTGTGGCGATCATCCAAGGTATCTTACCTCTTCAACTCATCCCTCTCTCTATGCCTTGTTCCC
ATATCCTTATCATACTCAAGGCCTTATAAATACCGTTCTCCTTTTGTTTTTCGTATAAATGGTGTTCTTCTCTATCAT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.907323
Expected error %
1.55643
Sequence Annotations 
Automatic Annotations
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAT77079.1| Score 70 E Value 2e-11 Identity 12.10% Align. Length 395bp (82.64%) Frame 2
putative Fip1 motif containing protein [Oryza sativa (japonica cultivar-group)]
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0150H03
Clone
Clone name
hba-150h3
LE_HBa0150H03
C07HBa0150H03
P150H03
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found