Clone Read LE_HBa0149M17_T7_90081

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0149M17_T7_90081
Primer
T7
ID from Seq. Facility
LE_HBa_149_M17-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
5 trimmed for vector and quality, 1163 raw
Sequence
>LE_HBa0149M17_T7_90081 (raw untrimmed)
AAGCCAGCCCCTGCCGTTCCCCGGGCGGGATCCTCCTTAGCAGTCCGACCGTGTCAGGCTATGCTAAAGCCTTGTACCTCGATGTCTATTAATTGAGATT
CCCCCTTTGTGAGAACTAGATATATATAGTGAATCTCGCCATGGTGCTAGGTTCTCCCCTTATTGACGAGTCACATACACTGAAAGAGCATATGACGGCA
GAAGATACGCATGAACTAGTCGCGTGAACAACGACATCGGTGAATGACGGTGGATTACTGTATCGGCGCTTCGCACATGTAAACTGTGGGAGGTGATTAT
ATTTGAGACCAGGACCTCGAAGACCCATTAGCCTGCCTGCCATGGCCTCGCCTAGAGCTCACGCACGCCACAATGGTCGTCGGCTCGATGGTCGTATGCT
TCGCTGGTATTAGGGATGTTCTAGAGTGACAAGTCTGTCACATATACCTTGGTTTCTCTGCAATGTCGGACTCAATCTAGTCAATCGAATTGTTTGGCTG
TATAACAGAATTCATAGATCTCGCTTTAATGCCTCTATGAGATATTCGGGCCTCTACCCACCAGCTAACAGGTTTCGATTATTCTACTTATTCCTTCCTT
AGATACCAGCAATGTACTCAGACTGTTCTGATTTTATCTATATTATTTTACTAAGCCTTTTTCGAGAACTCACTTTCTTAGGGTTCTTTGCATTAAGCCT
CACATTGGGTTTACCCTGTGTTGTGTACCCACTTCTTTTCTGTTCATGACATGGTACTCCCTCCTTGGTTCTCCGAATTTTGCTAAGCGCTCCTTTGTCT
TTTTTCTTGTCTCTTAATACTATATTATGGTATTCTTACCACACGAAGTGGTCCGCTTTGCTTTTCTAACATGTAAACGCCATGACCGGTTTTTTCAACC
TCCACCAGCCTTTCCTCCCTCTTTATAAGGCCGCACTGTGCCCCTTCTTCCCTGAGGAAAAACTTGAGCTCTGTGTCTTTGCTGTTCTGAAATCTGTCCA
ATACTCTCCGACATGTCTATTTTCTGTATTTTGGGCATGGCGTAACTTGTCTTCGAGTAATTGTTTGCGTGCTACAGAAATCGTGGGGGATCTCACTGGT
CTCTAGTGCTATCTAACAATCATTATATGTGCCTCCCCCACTTTTGTCACCCGATTTCTGTCC
>LE_HBa0149M17_T7_90081 (trimmed for quality and cloning vector)
GTTCT

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.64854
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0149M17
Clone
Clone name
hba-149m17
LE_HBa0149M17
C02HBa0149M17
P149M17
Clone type
BAC
Contamination
none
Estimated length
92,359
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found