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Clone Read LE_HBa0149M04_T7_90055

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0149M04_T7_90055
Primer
T7
ID from Seq. Facility
LE_HBa_149_M04-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
512 trimmed for vector and quality, 806 raw
Sequence
>LE_HBa0149M04_T7_90055 (raw untrimmed)
CCTCGGCCCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCNTTGGCTTCATATTCGAACTATGACCCCTTCTTCTTTCTAACTGCATCTTCATA
AACATTTAACTATGCCACTTTTAATGATTATATTCATAGAGATACTCCTGTCCTTTATACTCGAATAGACATCAATCATGACTAATAATCCACTTGTTTG
ACTTACTTGTGCAATGTGCGCTCTGTATTAGACATTTTCCTGTGTCTTGGAGTTTTTCTGCGTGAAATCGACCATTCATCTTTTGTTCAGTTTCTCCCTC
TCTTTGTTGCTTGCTCTTTAGATTTTGCTTAATCAAACCCTTTTTCTTTTACCCTAACTATCATACAATTAAGTAATAAGATGGAAAAAGTAACCCATTA
GTATAATTCAATGGATATCACCATTAACCCCCTATTCATTGAATTATTTACATCATTCCACTATCTTCATAATTATAATCCTGAATATATCTCATCCCCC
CTTAAAATCTCTAAACTAACATCGCACCCTAACATGGTATAGAATCCCAGTCGTACTGCCCGTCATGACTGATGATTGTCCATCCTGCAAAGCCGTCGCA
GCCTCCCTAGACTCCATTGTTATATGTATGTTCTCTGAGACACCCATCTTGCACTTAGAAGACACATTCCATCCGGAGTCTTACGACATACATACAGCAT
CTCTAATTTCCCTAAATCTCACAATTTTTAATGTACTTGACCAATGACAGGATTGTAATGGCTGTTATTTCTTTATTTGTCCTATTTGAAAATCTCTGTG
ATTCTT
>LE_HBa0149M04_T7_90055 (trimmed for quality and cloning vector)
AGCNTTGGCTTCATATTCGAACTATGACCCCTTCTTCTTTCTAACTGCATCTTCATAAACATTTAACTATGCCACTTTTAATGATTATATTCATAGAGAT
ACTCCTGTCCTTTATACTCGAATAGACATCAATCATGACTAATAATCCACTTGTTTGACTTACTTGTGCAATGTGCGCTCTGTATTAGACATTTTCCTGT
GTCTTGGAGTTTTTCTGCGTGAAATCGACCATTCATCTTTTGTTCAGTTTCTCCCTCTCTTTGTTGCTTGCTCTTTAGATTTTGCTTAATCAAACCCTTT
TTCTTTTACCCTAACTATCATACAATTAAGTAATAAGATGGAAAAAGTAACCCATTAGTATAATTCAATGGATATCACCATTAACCCCCTATTCATTGAA
TTATTTACATCATTCCACTATCTTCATAATTATAATCCTGAATATATCTCATCCCCCCTTAAAATCTCTAAACTAACATCGCACCCTAACATGGTATAGA
ATCCCAGTCGTA

This is probably not a useful sequence.

Problems:
  • High predicted error rate
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.93427
Expected error %
7.16374
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0149M04
Clone
Clone name
hba-149m4
LE_HBa0149M04
P149M04
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found