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Clone Read LE_HBa0004C15_SP6_892

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0004C15_SP6_892
Primer
SP6
ID from Seq. Facility
LE_Hba_004_C15-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
171 trimmed for vector and quality, 1182 raw
Sequence
>LE_HBa0004C15_SP6_892 (raw untrimmed)
CGCTTGGTTTCATCTATTAGGTACCTACGAGGATGTGGGGTCTTAACTTTAAGAAACTAATCGGGAAAATCATACTGGTCACTAGTCATTACAGTTCTGC
TGTAAAAGTCCGTCCGTTTCCAAGGACACGTATTCTTTGCTAATGTTATTGTTTCTACTTCAACTATTCCAATACTAACTAGTGGCGGAGCCACCTTATA
GTTAGGGGTGAAATGCCGTTGACTAGAATGGACCACCTTCTTAGGTGGCAGTGTTTACTTGAATTGTGTGAATGTGAAGTTATTAGTTTATTATTAATGA
GGCTATTAAGGCTTTTTATGTGAAGTAAGATGATAAATATGTCAATTCTTGTTAAATGTGCCATTATGAAATGGTTATGTGAAGTAGAATAGAGAGTATG
CTTGAATGAACTTATTCTTGATAACTGTTTGATGAAACATGTCATGAGAAGTATGTTAAGGATAGAGTCTCAAGGACTTATAAGATTCTGTGAATCATGT
AAAGTGTGTGATGTGATCAATGAATGTCTAAGCATTTATATAACTTAAACGTAGATGAAACGAAGCCTATGCTCAATGAGAGCTCAGGTGTGCACACTCT
CAAACATAAATGAATGAATGAAATCTAAATTATTACAGAGAGGGGAGTTTAAAGGTGAACGCTCTTCCGGAGTAGAAATGAAAGTTTAGATACCAATCCG
CACTTTCCCCCCACCTATCTAAAATTTTCTTAGAGGACGAGCCTTCCTATGCCACTTAAACCGTATTTTTCACACCCTTCTCCTCTCATGACCCTTCGAA
TCATAAAAAACACTTATAAACCATCCCGAATCACCAACACTACACGCTCCAACTCGCGCCCACACACGGTCGTTCTCCGACTTTTATGAACAGTCACTAC
AAAAGAAAACCATTGACAGTAAAATCAAAATACTATGGTAAAAATAATCTCTCTTATCCTAGAACCTTCACTTCCACTCCTCAAACCTTTCTTTACTCAA
TATATAGGACACCGATCTCTTCAGATAATAAGTTCGTATGAAGCATATTTACATTGCCTGTGTTTCAGTTTTCATTTATTTAGTATCTCTCATAATGATA
CAGCAGCCTCTTGGTCTTAGTCGTCCCGTACCATTTCACTCACCTTGGTCACAAAACGACGCCACGACCACCCACCGATATC
>LE_HBa0004C15_SP6_892 (trimmed for quality and cloning vector)
GGGTCTTAACTTTAAGAAACTAATCGGGAAAATCATACTGGTCACTAGTCATTACAGTTCTGCTGTAAAAGTCCGTCCGTTTCCAAGGACACGTATTCTT
TGCTAATGTTATTGTTTCTACTTCAACTATTCCAATACTAACTAGTGGCGGAGCCACCTTATAGTTAGGGG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.955688
Expected error %
1.41124
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0004C15
Clone
Clone name
hba-4c15
LE_HBa0004C15
C03HBa0004C15
P004C15
Clone type
BAC
Contamination
none
Estimated length
130,632
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found