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Clone Read LE_HBa0139N11_SP6_88580

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0139N11_SP6_88580
Primer
SP6
ID from Seq. Facility
LE_HBa_139_N11-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
807 trimmed for vector and quality, 952 raw
Genbank Accession
Sequence
>LE_HBa0139N11_SP6_88580 (raw untrimmed)
CGCCTTTGTAGCATTCTATAAAGTAGTTCATTCTCATTAACATTAGTATACTTGAGAGAGATACAACCATTAGGTTTACCGACTCAAAGTGCATTGCACA
TGAAAGGGCCACCACCAATAGGTCTACCGATTGAATGTGTATTATTAGTGTTAGAATATGTGCGTCCACTACCAGTCAATGGACTAGGTCCCTTGACCCA
AGAAAAACAGTGCAGAAGATTAAACAATATGAAAAACACAAAACAAGCAGTTTACGTGGATACCTCCTTGCTCAAGGGAGTAAAACCACGATCTGTTGCA
CAGGATTTACAACCGTCTTCACTAATCCTCTCAAGCAAAAGTGAAACCCGATTACAATCAATGTGAGAAAAAGTTATTAATCTCACGATCAAGTAATCTA
CCTATTACTTGAAGAGCCTAAGCGGATACCACACCGCCCACTAAACCACCTAACTCTAGATGACTTAGAATTTGACTAAGCAACAAAACAATGTTGCCCA
CTAAATCAGTTAACCTTAACTGATTTAGACTTTTACAAACCCAAAACAAATATCTGAATCCTTTATAGATTAAGAAACGATTTACAATGTAAGTACATAA
ACACAAAGCTCTAAATACAACAAAGATTCTTCTTTACTCTATCAGGTCGTTCTGTTGATTTGAGCAATGTTCTTCCTTGAAGATGGACTTCTGTTCAAGC
TTGTAAATTTTCAGAGAAAATCCAAGTTTAATTTGCCAAGTCTCAAATTTGTGTTTGTCGGAAAGAGATAATATAAATTCCCATAAATTCGTTGAAGTCA
TCCCATTGGCTGAAGGCCTGTTGTTGGAAAAGCTGTGCACCTACTGCATCAAAGATGACAGCTTTTCTAACAGCTGTCTTTTCTTCTTTTTCACGTCCCA
ATCCTGGGGGGTACAAGGTCCCTTGCATAATTCCTTATAATTTCTTGAAAGG
>LE_HBa0139N11_SP6_88580 (trimmed for quality and cloning vector)
TTCTCATTAACATTAGTATACTTGAGAGAGATACAACCATTAGGTTTACCGACTCAAAGTGCATTGCACATGAAAGGGCCACCACCAATAGGTCTACCGA
TTGAATGTGTATTATTAGTGTTAGAATATGTGCGTCCACTACCAGTCAATGGACTAGGTCCCTTGACCCAAGAAAAACAGTGCAGAAGATTAAACAATAT
GAAAAACACAAAACAAGCAGTTTACGTGGATACCTCCTTGCTCAAGGGAGTAAAACCACGATCTGTTGCACAGGATTTACAACCGTCTTCACTAATCCTC
TCAAGCAAAAGTGAAACCCGATTACAATCAATGTGAGAAAAAGTTATTAATCTCACGATCAAGTAATCTACCTATTACTTGAAGAGCCTAAGCGGATACC
ACACCGCCCACTAAACCACCTAACTCTAGATGACTTAGAATTTGACTAAGCAACAAAACAATGTTGCCCACTAAATCAGTTAACCTTAACTGATTTAGAC
TTTTACAAACCCAAAACAAATATCTGAATCCTTTATAGATTAAGAAACGATTTACAATGTAAGTACATAAACACAAAGCTCTAAATACAACAAAGATTCT
TCTTTACTCTATCAGGTCGTTCTGTTGATTTGAGCAATGTTCTTCCTTGAAGATGGACTTCTGTTCAAGCTTGTAAATTTTCAGAGAAAATCCAAGTTTA
ATTTGCCAAGTCTCAAATTTGTGTTTGTCGGAAAGAGATAATATAAATTCCCATAAATTCGTTGAAGTCATCCCATTGGCTGAAGGCCTGTTGTTGGAAA
AGCTGTG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.96083
Expected error %
0.233934
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0139N11
Clone
Clone name
hba-139n11
LE_HBa0139N11
P139N11
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found