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Clone Read LE_HBa0120A01_T7_87169

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0120A01_T7_87169
Primer
T7
ID from Seq. Facility
LE_HBa_120_A01-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
4 trimmed for vector and quality, 886 raw
Sequence
>LE_HBa0120A01_T7_87169 (raw untrimmed)
GCGCCCCACGGGGGCCCGGGGCCCCCCACCGGGCAAAACGGGGGGCCGCAGGGCCCCCGGGCCAAAGGGGGTGGGCCCCCCGGGGACCCAATAAGGGGNN
NNNNNNTAAAAAAAGNNNTGGGGGGGGAAGCCTAAAGGGGNNNNNNNNNANGG
GGGGGGGGGNNGNNNNNGNNNGNNNGGGGGGGGGGGGGGGGGGGGGG
GGGACCCCACGGGGGGGNNNNNNNNNTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
>LE_HBa0120A01_T7_87169 (trimmed for quality and cloning vector)
GGGG

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
3.35638
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0120A01
Clone
Clone name
hba-120a1
LE_HBa0120A01
C08HBa0120A01
P120A01
Clone type
BAC
Contamination
none
Estimated length
103,903
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found